Populus trichocarpa (black cottonwood): 18100455
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Entry
18100455 CDS
T01077
Name
(RefSeq) cell division cycle protein 27 homolog B isoform X1
KO
K03350
anaphase-promoting complex subunit 3
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
18100455
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pop01009
]
18100455
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
18100455
03036 Chromosome and associated proteins [BR:
pop03036
]
18100455
Protein phosphatases and associated proteins [BR:
pop01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
18100455
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Other subunits
18100455
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
18100455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_8
ANAPC3
TPR_11
TPR_19
TPR_17
TPR_14
TPR_CcmH_CycH
TPR-S
TPR_16
TPR_10
TPR_9
ARM_TT21_C
T7SS_EccA1_N
DUF7017
TPR_15
ANAPC8
Ribonuclease_T2
SRP_TPR_like
Motif
Other DBs
NCBI-GeneID:
18100455
NCBI-ProteinID:
XP_006381758
LinkDB
All DBs
Position
6:15915300..15923562
Genome browser
AA seq
760 aa
AA seq
DB search
MEAILIDCVNNSLRHFMYRNSIFMCERLCAEFPSETNLQLLAGCYLQNSQAYSAYHILKG
TQMAQSRYLFAISCFQMDLLNEAEAALCPPNEPGAEVPNGAPGHFLLGLIYRYTDRRKSA
IHHFKQALSIDPLFWAAYEQLCILGAAEEAAAVFDEAAALCIQKQYMNCASASHNLSISN
EDHNLVSARNFGLEDGSPRQLKHLQGNNLRDIPGNYHGASTLGGPVSQPSNGVPPNLSFY
NTPSPMATQLSGVAPPPLCRNLQPNCSNPSTLGSDNFPRSIVSSNIQAPRKKFVDEGKLR
KISGRLFFDSGPRRSTRLAAEAGANQNTSATLVAGYGTNNSSKYLGGSKLSSMAIRSVTV
RKGQSWANENYDEGIRNEAFDDSRANNTSSNCSSSPPGDSRPLETEVATMPVGGVIISAS
CILNGALEILGLLRTLGEGYRLFCMYRCQDALDVYMKLPHKHYNTGWVLCQVGKAYVELV
DYLEADRAFSLARRASPYSLEGLDVYSTVLYHLKEEMKLSYLAQELISTDRLAPQSWCAM
GNCYSLQKDHETALKNFQRAVQLDSRFAYAHTLCGHEYVALDDFENGIKSYQSALRIDAR
HYKSWHGLGMVYLRQEKNEFSEHHFQMAFQINPHSSVIMSYLGTALHALKRNEEALEMME
RAILADKKNPLPMYQKANILVSLESFDEALDVLEELKEYAPRESSVYALMGKIYKRRNMY
EKAMLHFGLALDFKPSATDVATIKADIEKLHVPDELEDSL
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgattctaatagactgtgtaaacaacagtcttcgccatttcatgtatcgaaac
tccattttcatgtgtgaacgactctgcgctgagtttccttccgagacaaatttacaattg
ttagccggatgttatttgcaaaatagtcaagcttactctgcatatcatattctaaaagga
acacaaatggctcaatctcgctacttgtttgcgatatcatgctttcagatggatcttcta
aatgaagctgaagcggcattatgtcctcctaatgagcctggtgctgaggttccaaatggt
gcacctgggcatttccttcttgggcttatctacaggtataccgatagaaggaaaagtgcc
atccatcactttaagcaggctttatctatagatcctttattctgggccgcctatgagcag
ctttgtatattaggtgctgctgaagaagcagctgcagtttttgatgaagcagctgctctt
tgcattcaaaagcagtacatgaattgtgcgtcagcatcccataacttgagcatatccaat
gaggatcataatttagtttctgctcgaaactttggcttggaagatggaagtccaaggcag
ttgaaacacttacaagggaataacctcagagatattcctggaaattaccatggagcctct
acattaggagggcctgttagtcagccttcaaatggtgttcctccaaacctgtcattttat
aacactccttcaccaatggccacacagttgtcaggtgtcgcgccaccaccattgtgcaga
aacttgcagccaaattgttcaaatcctagtacacttggttctgataactttcctaggtcg
attgtgagttctaatattcaggcccctcgtaaaaagtttgttgatgaagggaaattgcgg
aagatttctgggaggttattttttgattctggccctcggcgaagcacaaggcttgctgca
gaagcaggagccaaccaaaatactagtgctacactggttgcagggtatggaactaacaac
tcatctaaatatctcgggggttccaagttgagttctatggcaatacgttcagtgacagtt
cgtaagggacagtcatgggccaatgaaaattatgatgaaggtatacggaatgaggctttt
gatgattcacgtgcaaataatacatcttcaaattgtagttcatcgcctcctggggattct
agacctcttgaaacagaagtagcaaccatgcctgttggtggagtaatcataagtgcttca
tgtatcttaaatggtgctttagaaatattaggcctcctgagaactcttggggaaggttat
agacttttttgcatgtacagatgccaggatgcactggatgtgtacatgaaactaccacac
aagcattataatacaggctgggtgctttgccaggttggaaaagcttatgttgaattagtg
gattatttggaagctgatagagccttcagtcttgcccgtcgagcatcaccttacagttta
gaaggattggatgtatattctacagttctttatcatttgaaggaagaaatgaagttaagt
tacctggctcaggaactgatatcaactgatcgtttagctcctcaatcttggtgtgccatg
ggaaattgctatagtctgcagaaagaccatgaaactgccttgaaaaatttccagagagct
gtacaacttgattcgagatttgcatatgcacacaccttatgtggtcatgaatatgttgcc
ttggatgattttgagaatggaattaagagttaccagagtgctctacggatagatgctagg
cattacaagtcctggcatgggcttgggatggtctatcttcgacaagagaaaaacgagttt
tctgagcatcacttccaaatggctttccaaataaatccacattcttctgtgataatgtct
tatcttgggacggctttgcatgccttgaagagaaacgaggaagctctagagatgatggag
agggcaattttagctgataagaagaaccctcttcccatgtatcagaaggctaatatactt
gtgagcttggaaagctttgatgaagctctagatgtcctagaagagctgaaagagtatgct
ccacgtgaaagcagtgtttatgctttgatgggtaagatttataagaggcgtaacatgtat
gagaaggcaatgcttcactttggtcttgcgttggatttcaaaccatcagcaaccgatgtt
gctacaattaaggctgacatagagaagctgcatgtaccagatgaattagaagacagcttg
tag
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