Populus trichocarpa (black cottonwood): 18100631
Help
Entry
18100631 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC18100631 isoform X1
Organism
pop
Populus trichocarpa (black cottonwood)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GMC_oxred_N
GMC_oxred_C
NAD_binding_8
Abhydrolase_6
FAD_binding_2
Abhydrolase_1
FAD_binding_3
DAO
Pyr_redox_2
Fer4_10
FAD_oxidored
GIDA
Fer4_7
Fer4_8
Fer4
Motif
Other DBs
NCBI-GeneID:
18100631
NCBI-ProteinID:
XP_052310136
LinkDB
All DBs
Position
6:21752112..21768536
Genome browser
AA seq
1174 aa
AA seq
DB search
MEKQAEIELRPEDRGDDYDAIVVGSGYGGSVAACRMSTAGIRVCLLEKGRRWKAEDFPTD
IWKIMSAVRYQNQNLGVRFGPEDALFQLYEQNDSLAAVACGLGGGSLVNAGVMLPTPIRA
RRNLKWPKEWERDWDICESSAAAMLRIQSSSVKFPIAKVMGEIAGAEFEANIESSVKLSV
NFDVEEPPSNPPRLEQINSCFACGNCLAGCPYNAKNSTDKNYLVSAIQARCTIRTKCQVQ
YVIKNPHGICQPGGISRKRRWRVYINEIDYITSDWVILSAGVLGTTEILFRSQMRGLRLS
DTLGSGFSCNGNNLAYVAGSPAPLNGYGLNRKQLSEIPFQDRPGPSISSSHTSSLGFTIQ
SAILPRAYPYLLFEGITTYNWPTGYRFFQGIVHRLKHFIGLGLSQSIILNAMGYDESDGK
IMLEKDTDKICFHPPQDPLLPRKIIAFQKLTKKLGGILCMSRYRSTAVHLLGGCNASSDS
SGGVCNHKGQVFDPKTPATVHAGLYVCDASLIPCSVGINPSLTIATAAEHASRYLVQDIL
EYKNKISASVAAADQNQFSVTGKNLENDNESTVLIKETMRGYVGGMPCTVHLKMKMQSQN
LKSFDKRNWFIGEPHPLLRGKAGGYVVFRAIEKDRLHVIDGEMDLCVVDGRTPYTQYMHY
RLLLAAASGSRYILEGKKIMNPYHFALYAWRETTTLYVTFNKVAQSGSTGTMLNLKGELR
VSFTELLKCFISLKGNGRGRFIHLLLQTLIRTYILQIPRVTRENFIVTDSCDKSYPSSTI
DDIRTADGYIIRSRHWKNARNPLLLSREKVLNPILLLNGYTMESYWLPTEPHDLVRNLLE
EGHDVWLLQTRLHPLNPANNATIEDIGKYDIPPAFGKILEVHGPSTKIHVVAHCAGGLAI
HIALMGGHVSATHIASLSCTNSSMFFKLTALATIKMWLPLVPISMAILGKNKILPLLEKS
KGSSGHRLLKFIARCLPRYERCTCKECEVLSGIFGNAFWHENVSPALHHWLNTESATKLP
MSAFPHLRRICNSGYIVDSNGNNSFLIHPERMAISTLYISGGRSLLVTPETSYLANKYMK
LHQPGFRHERAVVDGFGHSDLLIGEKSHEKVFPHIISHIRLAEQEGNDLTPRKKYSKEAL
DWGDDPYREYGDFGCWFFALAIIFFFLLLHVLFW
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atggagaaacaagcagagatagaactaaggcctgaagacagaggagatgattatgatgct
attgttgtggggtctggatatggtggttctgttgctgcttgtcgaatgtcaacggcggga
ataagggtttgtctgctagagaaaggtcggagatggaaagcagaggatttcccaactgac
atctggaagattatgtcagctgtgaggtatcagaaccagaacttaggcgtcagatttgga
ccagaggatgctttatttcagttatatgaacagaatgattctttagcagcagtggcttgt
ggacttggtggaggttccctagtcaatgctggagtgatgctgccaacaccaattcgtgct
agaaggaatctaaaatggccaaaggaatgggaaagagattgggatatttgtgagtcttct
gctgcagcaatgctgagaattcaaagcagttcagtcaaatttcctatagccaaagtcatg
ggggaaatagctggagcagagtttgaagcaaatattgagagttctgtaaagctaagtgtg
aattttgatgttgaagaacctccttctaatccaccaaggcttgagcagattaatagctgc
tttgcctgtggaaattgtcttgctgggtgtccttacaacgccaaaaattctaccgataaa
aactatcttgtctcagcaatacaggcaagatgcactataaggacaaaatgtcaagttcag
tatgtgatcaagaatccccatggaatttgccaaccaggcggaattagcagaaaaagaaga
tggcgtgtttacataaatgagattgactacataacatccgattgggtaattctgtcagct
ggagttttgggcacaactgagatacttttccggtcacagatgagaggattgaggctttcg
gatactctcggatctggattcagttgtaatggcaataatctcgcttatgttgctggaagc
cctgcacccctgaatggttatggattaaacagaaagcaattatcagagatacctttccaa
gataggccagggccatctatctcttcatctcacacttcttcattgggttttacaatccag
agcgctatacttccaagagcttatccgtatctgttgttcgaagggattacaacttataac
tggccaactggttaccgattctttcaggggattgtccataggctgaagcattttataggt
cttggcttaagccaatctatcattctcaatgcaatgggatatgatgaaagtgatgggaaa
atcatgttagaaaaagacacggacaaaatctgctttcatccaccccaggatcccttactt
ccacgaaaaatcatagcttttcaaaagctgaccaaaaaactcgggggaatcctttgcatg
tctaggtacagaagcacagcagttcatcttttaggtggttgtaatgcatcatcagattct
tcaggtggggtatgcaaccataaaggtcaggtttttgacccaaaaactcctgctactgtg
catgcaggcctctacgtttgtgatgcttctctaatcccatgttccgttggcataaaccca
tctcttactattgcaacagccgctgaacatgcaagcaggtaccttgtgcaggacattctc
gagtacaaaaacaaaattagtgctagtgttgcagctgctgatcagaatcaattttctgtc
acgggtaaaaatttagagaatgacaatgaatcaactgttctgattaaagaaaccatgaga
ggctatgtggggggcatgccatgcacagttcatctaaaaatgaaaatgcagtcacagaat
cttaagagctttgataaacggaactggtttataggagaacctcaccctcttctgagggga
aaggctggtgggtatgtagtgttcagagccattgaaaaggacagattacatgtcatagat
ggggaaatggatttgtgtgtggtcgatggcagaactccttatacgcagtatatgcactat
cgacttctccttgcagctgcttctggttccagatatatacttgagggaaagaagataatg
aatccttaccacttcgcattgtacgcttggagggagacaacaacactgtatgttacattt
aataaagttgcccagagtggctcaacaggcaccatgctgaatttgaaaggagagcttaga
gtttccttcacagagcttctgaagtgttttataagccttaaaggaaacgggagaggaaga
ttcatacatcttcttttacagacactcataaggacttacatcttacaaataccacgagtg
actcgcgagaacttcatcgtaacagattcatgcgataagagttatccaagcagcactatc
gatgatataagaacagcggatggatatatcattagaagcaggcactggaaaaatgctaga
aatcccttgttgcttagcagagaaaaagtactaaatcctatcctccttctcaatggttat
actatggagagttactggctaccaacagaaccacatgatttagtcagaaatttgttggaa
gaagggcatgatgtttggctattgcagactagattgcaccctctgaatcctgcaaacaac
gctactatagaagatattggaaaatatgacatccctcctgcatttggtaagatccttgaa
gttcacgggcccagcacaaagattcatgtagtggcacactgtgctggaggcttggccatt
catatagctctcatgggagggcatgtctctgcgacccatatagcttctctgtcttgtacc
aattcttcaatgttcttcaagcttacggcattggccacaatcaaaatgtggcttcccctg
gtcccaatatcaatggctatactgggcaagaataaaatcctgcctcttttggaaaaatca
aagggaagctccggacacaggcttttgaaattcatagctcggtgtttaccacgatatgag
agatgcacgtgcaaggagtgtgaggtcctctctggaatatttggaaatgcattctggcat
gaaaatgtaagccccgccctgcaccactggttgaatacagaaagcgcaacaaagcttccc
atgtcagcatttcctcacctgagaagaatctgcaactctggatatattgtagacagtaat
ggtaacaactcattcttgatccatccagagagaatggcaatctcaacgctgtatatttct
ggagggcggagtctccttgtgaccccagagacttcttatcttgctaacaagtacatgaag
ctgcaccaacctggttttagacatgaaagggcggtggtggacggttttgggcattcagat
ttattgattggagagaagtctcatgagaaagtttttcctcacataatatctcatatcaga
ttagccgaacaagaaggaaatgatttgactcctagaaaaaagtacagcaaagaggctttg
gactggggtgatgatccttacagagaatatggggacttcggttgctggtttttcgcgttg
gctattattttcttcttcttgttattacacgtgttgttctggtga
DBGET
integrated database retrieval system
