KEGG   Populus trichocarpa (black cottonwood): 18100651
Entry
18100651          CDS       T01077                                 
Name
(RefSeq) histone deacetylase 2 isoform X1
  KO
K11418  histone deacetylase 11 [EC:3.5.1.98]
Organism
pop  Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:pop00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pop03036]
    18100651
Enzymes [BR:pop01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     18100651
Chromosome and associated proteins [BR:pop03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class IV HDACs
     18100651
SSDB
Motif
Pfam: Hist_deacetyl YhiY
Other DBs
NCBI-GeneID: 18100651
NCBI-ProteinID: XP_006382022
UniProt: U5GC31
LinkDB
Position
6:23374372..23381817
AA seq 391 aa
MTFRVTPVITESTRNLGKSTLYFFLTIAAIKASHSLYRCIRSLTMSSSSSSTSNSTADAS
TLRRNRILSSKLYFDVPLSKVPLIYSTAYDISFLGMEKLHPFDSSKWGRICRFLIVDGVL
DKNSIIEPLEASKDDLLVVHTESYLSSLKSSANVAMIIEVPPVALLPNCLVQQKVLYPFR
KQVGGTVLAAKLAKERGWAINVGGGFHHCCSERGGGFCAYADISLCIHYAFNRLDISKVM
IIDLDAHQGNGHERDFSNDRRVYILDMYNPEIYPFDHEARRYIDQKVEVVSGTTTDEYLV
KLDEALAVAGKMFDPELVVFNAGTDILDGDPLGRLKISPDGITSRDEKVFRFAREKNASL
VMLTSGGYMKSSARVIADSIANLSKQTLINF
NT seq 1176 nt   +upstreamnt  +downstreamnt
atgacgttccgagtcacaccagtaatcactgagtcaactcggaatctcggcaaatcaacg
ctatatttcttcctcacaatcgccgctatcaaagcatcacattctctctaccgctgcatt
cgctctctaacaatgtcatcttcttcatcttcaacgagtaacagtactgctgatgcctct
actctccgccgaaatcgtattctctctagcaagctctattttgacgtgcctctctctaag
gtaccgctaatttactcgacggcttatgatatttcgtttcttggcatggaaaagctgcac
ccctttgattcttctaaatggggtcgcatatgtcgattcctcatcgtggatggtgttcta
gacaaaaatagtatcattgaacctctagaagcgtcaaaagatgatctccttgtggttcac
acggagtcatatttgagcagtctaaagagcagtgcaaatgttgccatgataatcgaggtt
cccccagtcgcactacttcccaattgtcttgtgcagcaaaaagttctttacccatttcgc
aagcaggtagggggaactgttctggcagcaaaacttgcaaaagagcgagggtgggccatc
aatgttggaggaggtttccatcactgctgtagtgaaagaggaggtggattttgtgcttat
gcagacatttctctttgcattcattatgccttcaaccggcttgatatatcaaaggtgatg
ataattgacctcgatgcacaccaaggaaatggccatgaaagggatttttccaatgacaga
cgagtttatattctggatatgtacaaccctgaaatatatccttttgatcatgaagctagg
aggtacattgatcagaaggttgaagtagtgagtggtaccacaacagatgagtacttggtg
aaacttgatgaagcactcgcggttgctggtaaaatgtttgatcctgagttggtggtcttc
aatgccggcactgatatcctggatggagacccattagggaggttaaagattagccctgat
ggaataactagcagagatgagaaagttttcaggtttgctcgtgaaaagaatgcctctctt
gtcatgttgacatcaggtggttacatgaagtccagtgccagagttatagcagattcgata
gcgaacctctcaaaacagaccttaataaatttctag

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