KEGG   Populus trichocarpa (black cottonwood): 18100711
Entry
18100711          CDS       T01077                                 
Name
(RefSeq) glutamate receptor 2.8-like
  KO
K05387  glutamate receptor, ionotropic, plant
Organism
pop  Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:pop00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:pop04040]
    18100711
Ion channels [BR:pop04040]
 Ligand-gated channels
  Glutamate (ionotropic)
   18100711
SSDB
Motif
Pfam: ANF_receptor Lig_chan Peripla_BP_6 Lig_chan-Glu_bd SBP_bac_3
Other DBs
NCBI-GeneID: 18100711
NCBI-ProteinID: XP_052309460
LinkDB
Position
6:26291071..26297456
AA seq 984 aa
MIMKKYSLNPVLSSFFFLSLMILFSEMGVAQNTTSTIPVNVGVVLDLASLEANIALSCIN
MALSDFYASHGDYKTRLVLNTRDSKKDVIGAAAAALDLIKNVEVQAILGPTTSMQANFVI
DLGEKAHVPIISFSATSPSLTSIGSSYFLRATQNDSAQVNAISAIVQAFGWKEAVPIYID
NEYGEGIIPYLTDALHVVDARVPYRSVISPSATDVQIVEELNKLMTMLGYCHLTMQTRVF
IVHMYPSLGTRLFTKAKEIGMMSEGYVWIMTDGLSVDFLSSPNHSVTDTIQGVLGIKPYV
PKTKGLEYLRARWKRKFLRDNPNNIDAELNIYGLLAYDAATALALAVEKAGTTNFDFQKA
NVPSNSSTDLATLGISLNGPNILQALSTTSFKGLTGDYLFVDGQLQSPAFQIVNVNGNAG
RRIGFWTPTTEGLVKTLNPRINKRMNSTSTSRVSTVIFPGDTTVVPKGWEIPTNEKKLKI
GVPVKSGFSEFVAVTKDPGSNTATFTGFCIDVFDAVVKALPYALPYEYTPFANSDGEPAG
TYNDLAYQVYLKNYDAVVGDITIVYNRSLYIDYTLPFTESGVSMIVPIADNNSKNAWVFM
QPLTWDLWVSSFLFFVFIAFVVWVLEHRINEDFRGSASDQAGTSFWFSFSTMVFAQRERV
VSNLSRAVIIIWCFVVLILTQSYTASLASLLTVEQLQPTVTDVRELIKKGEYVGYQNGSF
VLGLLLDLGFDKSKLKVYGSPEECHRLFSKGSGNGGIAAAFDELAYIKLILSRYCSKYTM
IDPKFKTGGLGFVFPKGSPLMPDISRAILNVTEGDKMKRIEDSWFGKKGTCPESSSSITS
NSLSLKSFWGLFLIAGLAALLALIIFIVMFVYRERNVLRSSDSTASIWSRIENFFRIFIQ
RDSTSSTYRQSDLNDRNGISLPTMSAPSPSDYSVDTEYPANRSSSSYDSSPNREAPQEVV
IDIDQLTNRNQERLAALEIDHENN
NT seq 2955 nt   +upstreamnt  +downstreamnt
atgatcatgaaaaaatactctttaaatcctgttctatcttcatttttcttcctttctttg
atgattttgttctcagaaatgggggtggcccagaacacaacatctacaatcccagtgaat
gtaggagtggttcttgacttggcttctttggaggccaatattgctttgagctgcatcaac
atggccctttcagacttctatgcctctcatggtgactacaaaactagactggtcctcaac
accagggactcaaagaaagatgttattggtgcagctgctgcagccctggacttgataaaa
aatgtggaagtgcaagcaatcttagggccaacaacatcaatgcaagccaattttgttatt
gaccttggagaaaaagctcatgtgccaattatatctttttctgcaaccagtccctctctt
acttccatcgggagttcatatttcttgcgagcaacacaaaatgattcagctcaagtgaat
gccataagtgctatagttcaagcctttggatggaaagaagcggtgcccatctacattgac
aatgaatatggagagggaatcataccttatttaactgatgctctgcacgtagttgatgct
cgagtgccctaccggagtgtcatttctccatcggccactgatgttcaaattgttgaggag
cttaataagttgatgacaatgttaggatattgccatttaacaatgcaaactagagttttc
attgtgcatatgtatccctctctaggcactcggcttttcaccaaggcaaaagagattgga
atgatgagtgaaggctatgtttggatcatgactgacggtctgagtgttgatttcttgagt
tcaccaaatcattctgtcaccgatactatccaaggagtattgggtattaaaccttatgtt
ccaaaaacaaaagggcttgaatatttgcgagctcggtggaaaaggaaattcctacgagat
aatccaaataatattgatgctgagttgaacatttatggactcctggcctatgatgctgct
acagcattggccttggcagttgagaaagccggcactacaaattttgacttccaaaaggca
aatgttcctagcaattcatcaactgatcttgcaactcttggcatctctttaaatggtcca
aacattcttcaagctttatcgaccactagtttcaaaggccttacaggagattaccttttt
gttgatgggcagttgcaatcaccagcttttcagatagttaatgtgaatgggaatgcagga
agacggattggattttggacgccaacaacagaaggacttgtgaaaacactgaatccgaga
ataaataaacgtatgaattcaacttctacttccagagtttcaactgtaatttttcctggg
gatacaactgtggttcccaagggttgggagattcccacaaatgagaagaagttgaaaata
ggagtgcctgtgaagtctggcttcagtgagtttgtagcagtaacaaaagatcctggttcc
aacaccgcaacattcaccggattctgcatagatgtttttgatgctgtagtcaaagcattg
ccttatgctttgccttatgagtacaccccctttgccaactctgatggcgaacctgctgga
acttacaacgatctggcctatcaagtgtacttgaagaattatgatgctgtggttggagac
ataactattgtctacaacaggtccttgtacatcgactataccctgcctttcacagaaagt
ggtgtctccatgattgttccgattgcagacaacaacagcaaaaatgcatgggtcttcatg
caacctttgacatgggacctttgggtgagcagttttttgttctttgttttcattgcattt
gtggtctgggttcttgagcacagaataaatgaagattttcgagggtcagcttcagatcaa
gctggcactagcttctggttttccttctcaactatggtttttgcacaacgggagagagtg
gttagcaacttgtctagggcggtgataatcatctggtgttttgttgtgttgatcctcacg
cagagttacaccgccagtttagcaagcctacttaccgtcgagcagctgcagcctacagtt
actgatgtacgtgagctcattaagaaaggggagtatgtgggataccagaatggttctttt
gttctaggactcttgttagacttggggttcgacaagtccaagctcaaggtgtatggttct
ccagaagaatgccaccgtcttttctctaaaggaagtggaaatggtggtattgctgctgct
ttcgacgaacttgcatatataaagctcattctgtcaagatattgctccaaatataccatg
attgatcctaaatttaaaacaggcggtttaggctttgtcttccctaaaggttctcctcta
atgcctgatatatcgagggcaattttaaatgtgaccgagggagataaaatgaagcgaata
gaggattcatggtttggcaaaaaaggcacatgtccagaatccagctcctcaattacatct
aatagccttagtctcaagagtttctgggggttatttttaattgcaggactagctgcattg
ttagctctcattatcttcatagtcatgtttgtttaccgagaaagaaacgtcttgaggtcc
tctgattccacagcttcaatatggagtagaatcgaaaacttctttagaattttcattcaa
agggactcgacatccagtacttacagacaaagtgatctgaatgatagaaatggcatcagt
ctgcctactatgagtgcgccaagcccatctgactattcagttgacacggaatatcctgcc
aatcgatcttcttcaagctatgattctagtccaaatagggaagcacctcaagaagtagta
atagatatcgatcagcttaccaaccgaaatcaggagagactggcagctttggaaatagac
catgaaaataattga

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