Populus trichocarpa (black cottonwood): 18100711
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Entry
18100711 CDS
T01077
Name
(RefSeq) glutamate receptor 2.8-like
KO
K05387
glutamate receptor, ionotropic, plant
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pop04040
]
18100711
Ion channels [BR:
pop04040
]
Ligand-gated channels
Glutamate (ionotropic)
18100711
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GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Peripla_BP_6
Lig_chan-Glu_bd
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
18100711
NCBI-ProteinID:
XP_052309460
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All DBs
Position
6:26291071..26297456
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AA seq
984 aa
AA seq
DB search
MIMKKYSLNPVLSSFFFLSLMILFSEMGVAQNTTSTIPVNVGVVLDLASLEANIALSCIN
MALSDFYASHGDYKTRLVLNTRDSKKDVIGAAAAALDLIKNVEVQAILGPTTSMQANFVI
DLGEKAHVPIISFSATSPSLTSIGSSYFLRATQNDSAQVNAISAIVQAFGWKEAVPIYID
NEYGEGIIPYLTDALHVVDARVPYRSVISPSATDVQIVEELNKLMTMLGYCHLTMQTRVF
IVHMYPSLGTRLFTKAKEIGMMSEGYVWIMTDGLSVDFLSSPNHSVTDTIQGVLGIKPYV
PKTKGLEYLRARWKRKFLRDNPNNIDAELNIYGLLAYDAATALALAVEKAGTTNFDFQKA
NVPSNSSTDLATLGISLNGPNILQALSTTSFKGLTGDYLFVDGQLQSPAFQIVNVNGNAG
RRIGFWTPTTEGLVKTLNPRINKRMNSTSTSRVSTVIFPGDTTVVPKGWEIPTNEKKLKI
GVPVKSGFSEFVAVTKDPGSNTATFTGFCIDVFDAVVKALPYALPYEYTPFANSDGEPAG
TYNDLAYQVYLKNYDAVVGDITIVYNRSLYIDYTLPFTESGVSMIVPIADNNSKNAWVFM
QPLTWDLWVSSFLFFVFIAFVVWVLEHRINEDFRGSASDQAGTSFWFSFSTMVFAQRERV
VSNLSRAVIIIWCFVVLILTQSYTASLASLLTVEQLQPTVTDVRELIKKGEYVGYQNGSF
VLGLLLDLGFDKSKLKVYGSPEECHRLFSKGSGNGGIAAAFDELAYIKLILSRYCSKYTM
IDPKFKTGGLGFVFPKGSPLMPDISRAILNVTEGDKMKRIEDSWFGKKGTCPESSSSITS
NSLSLKSFWGLFLIAGLAALLALIIFIVMFVYRERNVLRSSDSTASIWSRIENFFRIFIQ
RDSTSSTYRQSDLNDRNGISLPTMSAPSPSDYSVDTEYPANRSSSSYDSSPNREAPQEVV
IDIDQLTNRNQERLAALEIDHENN
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgatcatgaaaaaatactctttaaatcctgttctatcttcatttttcttcctttctttg
atgattttgttctcagaaatgggggtggcccagaacacaacatctacaatcccagtgaat
gtaggagtggttcttgacttggcttctttggaggccaatattgctttgagctgcatcaac
atggccctttcagacttctatgcctctcatggtgactacaaaactagactggtcctcaac
accagggactcaaagaaagatgttattggtgcagctgctgcagccctggacttgataaaa
aatgtggaagtgcaagcaatcttagggccaacaacatcaatgcaagccaattttgttatt
gaccttggagaaaaagctcatgtgccaattatatctttttctgcaaccagtccctctctt
acttccatcgggagttcatatttcttgcgagcaacacaaaatgattcagctcaagtgaat
gccataagtgctatagttcaagcctttggatggaaagaagcggtgcccatctacattgac
aatgaatatggagagggaatcataccttatttaactgatgctctgcacgtagttgatgct
cgagtgccctaccggagtgtcatttctccatcggccactgatgttcaaattgttgaggag
cttaataagttgatgacaatgttaggatattgccatttaacaatgcaaactagagttttc
attgtgcatatgtatccctctctaggcactcggcttttcaccaaggcaaaagagattgga
atgatgagtgaaggctatgtttggatcatgactgacggtctgagtgttgatttcttgagt
tcaccaaatcattctgtcaccgatactatccaaggagtattgggtattaaaccttatgtt
ccaaaaacaaaagggcttgaatatttgcgagctcggtggaaaaggaaattcctacgagat
aatccaaataatattgatgctgagttgaacatttatggactcctggcctatgatgctgct
acagcattggccttggcagttgagaaagccggcactacaaattttgacttccaaaaggca
aatgttcctagcaattcatcaactgatcttgcaactcttggcatctctttaaatggtcca
aacattcttcaagctttatcgaccactagtttcaaaggccttacaggagattaccttttt
gttgatgggcagttgcaatcaccagcttttcagatagttaatgtgaatgggaatgcagga
agacggattggattttggacgccaacaacagaaggacttgtgaaaacactgaatccgaga
ataaataaacgtatgaattcaacttctacttccagagtttcaactgtaatttttcctggg
gatacaactgtggttcccaagggttgggagattcccacaaatgagaagaagttgaaaata
ggagtgcctgtgaagtctggcttcagtgagtttgtagcagtaacaaaagatcctggttcc
aacaccgcaacattcaccggattctgcatagatgtttttgatgctgtagtcaaagcattg
ccttatgctttgccttatgagtacaccccctttgccaactctgatggcgaacctgctgga
acttacaacgatctggcctatcaagtgtacttgaagaattatgatgctgtggttggagac
ataactattgtctacaacaggtccttgtacatcgactataccctgcctttcacagaaagt
ggtgtctccatgattgttccgattgcagacaacaacagcaaaaatgcatgggtcttcatg
caacctttgacatgggacctttgggtgagcagttttttgttctttgttttcattgcattt
gtggtctgggttcttgagcacagaataaatgaagattttcgagggtcagcttcagatcaa
gctggcactagcttctggttttccttctcaactatggtttttgcacaacgggagagagtg
gttagcaacttgtctagggcggtgataatcatctggtgttttgttgtgttgatcctcacg
cagagttacaccgccagtttagcaagcctacttaccgtcgagcagctgcagcctacagtt
actgatgtacgtgagctcattaagaaaggggagtatgtgggataccagaatggttctttt
gttctaggactcttgttagacttggggttcgacaagtccaagctcaaggtgtatggttct
ccagaagaatgccaccgtcttttctctaaaggaagtggaaatggtggtattgctgctgct
ttcgacgaacttgcatatataaagctcattctgtcaagatattgctccaaatataccatg
attgatcctaaatttaaaacaggcggtttaggctttgtcttccctaaaggttctcctcta
atgcctgatatatcgagggcaattttaaatgtgaccgagggagataaaatgaagcgaata
gaggattcatggtttggcaaaaaaggcacatgtccagaatccagctcctcaattacatct
aatagccttagtctcaagagtttctgggggttatttttaattgcaggactagctgcattg
ttagctctcattatcttcatagtcatgtttgtttaccgagaaagaaacgtcttgaggtcc
tctgattccacagcttcaatatggagtagaatcgaaaacttctttagaattttcattcaa
agggactcgacatccagtacttacagacaaagtgatctgaatgatagaaatggcatcagt
ctgcctactatgagtgcgccaagcccatctgactattcagttgacacggaatatcctgcc
aatcgatcttcttcaagctatgattctagtccaaatagggaagcacctcaagaagtagta
atagatatcgatcagcttaccaaccgaaatcaggagagactggcagctttggaaatagac
catgaaaataattga
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