Populus trichocarpa (black cottonwood): 18100737
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Entry
18100737 CDS
T01077
Name
(RefSeq) coatomer subunit beta-2
KO
K17301
coatomer subunit beta
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
18100737
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pop04147
]
18100737
Membrane trafficking [BR:
pop04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
18100737
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
18100737
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT_2
Cnd1
HEAT
Coatomer_g_Cpla
Motif
Other DBs
NCBI-GeneID:
18100737
NCBI-ProteinID:
XP_006382143
UniProt:
B9N680
LinkDB
All DBs
Position
6:complement(26583880..26589732)
Genome browser
AA seq
949 aa
AA seq
DB search
MEKSCTFLVHFDKGTPAIATEIKEALEGSDVSAKIDAMKKAISLLLNGETLPQLFITIVR
YVLPSEDHTVQKLLLLYLEIIDKKDAKGTVLPEMILICQNLRNNLQHPNEYIRGVTLRFL
CRLNETEIIEPLIPSVLQNLEHRHPFIRRNAISAVMAIYKLPHGEQLLVDAPEMIEKVLS
TELDQSAKRNAFLMLFNCDQDRATNYLLTNVDKVSEWGELLQMVVLELIRKVCRTNRGEK
GKYIKIIISLLNAPSNAVIYECASTLVSLSSAPTAIRAAASTYCQLLISQSDNNVKLIVL
DRLNELKSSHREIMVDRIMDVLRALSSPNLDIQKKTLDIALDLITPRNITEVVLMLKKEV
MKTQNGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVAIFVR
EIIETNPKLRVSIITRLLDTFYQIRAARVCSCALWIIGEYCLSLSEVESGIATIKQCLGE
LPFYSVSEEGEAPTDASKNSQQPSSVTVSSRRPAILSDGTYATQSAASETAFSPPTIVQG
SLAAGNLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSKVEVNKASAQALLIMVSMIQL
GQSPVLSHPIDGDSYDRILLCIRLLCSTGDEVRKIWLQSCRQSFVKMLSEKQLRETEELK
AKAQVSYAQPDDLIDFYHLKSRKGMSQLELEDEVQDDLKRATGEFIKDGDDANKLNRILQ
LTGFSDPVYAEAYVTVHHYDIVLDVTVINRTKDTLQNLCLELATMGDLKLVERPQNYILA
PESSKQIKANIKVSSTETGVIFGNIVYETSNVLERTVVVLNDIHIDIMDYISPAVCTDAA
FRTMWAEFEWENKVAVNTIIQSEKDFLDHVIKSTNMKCLTAPSALDGDCGFLAANLYAKS
IFGEDALVNISIEKQADGKLSGYIRIRSKTQGIALSLGDKITLKQKGGS
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggagaagtcttgtacatttcttgtgcactttgataaagggaccccagctatagctacg
gagatcaaagaggcgcttgaaggcagtgatgtgtcggctaagatcgatgccatgaagaag
gcaattagtcttctattaaatggggaaaccttaccacaactgtttatcaccatagtcaga
tatgtcctgccgtcggaagaccacacagtccagaaacttttgcttctgtatctggagatt
attgacaagaaggatgccaaggggacggtgttaccagagatgattctcatatgccaaaat
ctgaggaacaatcttcagcaccccaatgaatacattcgtggggtgacattgaggtttctc
tgtagattgaatgagacagaaataattgaaccacttatcccttcagtccttcagaatcta
gagcaccgacatccattcattaggaggaatgctatctcagctgtgatggccatttataag
cttcctcatggtgagcagcttttggttgatgctccagaaatgattgagaaggttctgtca
acagagctagatcagtcagctaagaggaatgcttttctcatgctctttaattgtgatcaa
gatcgggccactaattacctcttgaccaatgttgataaggtctctgaatggggtgaactg
ctgcagatggttgtcttagagttgattcggaaggtgtgcagaacaaatcgaggagagaag
ggaaaatacattaagatcattatatcattgctgaacgccccttctaatgcagttatttat
gagtgtgctagtacacttgtttctttgtcatctgcacctactgctattagagctgctgcc
agcacctattgccagcttctaatttctcagagtgacaataatgtgaagcttatagttctt
gatcgtctgaatgagctcaagtcttctcatagagagatcatggttgacaggattatggat
gtgcttagggcactatccagcccgaatctagacattcagaaaaagactctagatattgcc
cttgatttgatcaccccaaggaacatcaccgaggttgttctcatgttgaagaaggaagtt
atgaagactcaaaatggagagcttgagaagaatggtgagtacaggcaaatgctcatccaa
gccatccattcttgtgccatcaagttcccagaggtggcaagcacagtggttcatttgttg
atggatttcctgggagacagtaatgttgcttcagctattgatgttgccatatttgtccgg
gagataattgagacaaatccaaaacttagggtttctattataacaagactgttggatact
ttctaccagatacgagctgcaagggtttgctcctgtgctctttggataatcggcgaatat
tgcctgtccctttctgaagttgaaagtggcattgcaaccatcaagcaatgcctgggagaa
ttaccattttattcagtttcagaagaaggggaagcacctaccgatgcttctaagaactct
caacaaccaagttctgttacagtttcttctagaaggcctgctattctttctgatgggact
tacgcaacacagagtgctgcttctgaaactgccttttccccgcctaccattgttcagggg
tcattggctgctgggaacttgagatcccttcttctcactggtgattttttcctgggagca
gttgtagcatgcactttgacaaagcttgttctgagattggaagaggtgcagccttctaag
gttgaagtaaacaaagcatccgcccaggcattgttgatcatggtctctatgatacaactt
gggcagtcaccagttctatcacacccaattgacggcgactcttatgataggattctcttg
tgcataagattactatgcagtacaggtgatgaggtcaggaagatatggttgcagtcttgc
cgtcagagttttgtcaaaatgctttcagagaaacagctgagggaaactgaggaactaaag
gcaaaggctcaggtttcttatgcacaaccagatgaccttattgatttctaccatttgaag
agcaggaagggtatgagtcagctggagttggaggatgaagttcaagatgatttgaaaaga
gcaacaggagagttcatcaaggatggggatgatgcaaataagcttaaccgcattcttcag
ctcacaggattcagcgaccctgtttatgctgaagcttatgtgacagttcatcactatgac
attgtacttgatgtcacagtgatcaacaggacaaaagacactctccagaatttgtgcttg
gaacttgccacaatgggtgacctgaaactggtggagcggccccagaactacatcctagct
cccgagtctagtaagcagataaaggccaacatcaaggtgtcctcaaccgagactggagtg
atttttggaaatattgtgtatgagacatccaacgtacttgagcggacagttgttgtcctt
aacgacatccacattgatatcatggattatatttctcctgcagtttgtacagatgctgct
ttcagaacaatgtgggcagagtttgaatgggaaaacaaggtcgctgtgaacacaataatt
caaagtgagaaggattttctggatcatgtcatcaagtctaccaatatgaagtgtcttaca
gcaccgtctgcactagacggggactgcggtttcttggctgcaaatttatatgcaaaaagc
atttttggtgaggatgcgttggttaatatcagcatagaaaaacaagctgatgggaagctt
agtgggtacatccggatacggagcaagacccagggaattgccctcagcctaggggataag
atcactctcaagcagaagggaggcagttga
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