Populus trichocarpa (black cottonwood): 18100839
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Entry
18100839 CDS
T01077
Name
(RefSeq) zinc finger protein NUTCRACKER
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
18100839
Transcription factors [BR:
pop03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
18100839
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_4
zf-C2H2_STOP2_C
zf-C2H2_6
zf-met
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
18100839
NCBI-ProteinID:
XP_006380280
UniProt:
U5G9H1
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All DBs
Position
7:14731717..14734703
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AA seq
477 aa
AA seq
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MSENIMAAEEAITSSYNGSVENPVGGSNPPALKKKRNLPGTPDPEAEVIALSPKTLMATN
RFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTNNEVRKRVYVCPEKTCVHHHPSRALG
DLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYKCDCGTLFSRRDSFI
THRAFCDALAEETARVNAVSSIRNLTAGNISYHLPGNPLGPNMAQHFSSIFKPISSNDHH
TRQGGLSLWMHQGGVPHVSEAMGNNIQEIHQIGAMTSSGAIFGDPLAVSCSSTPPSDHYQ
LNWPVFGNKISSNNAHEELTSTLVLPLSNVKEAAAASQLVSVPSLYSTQQQQSHQTTSAN
MSATALLQKATQIGATSTDPSFLGSFGLKSFSTKAQDGNNKFCGLYGSSPISTNPASDME
NSGNDEIPTLNQLQMYSAKRQKIFQSDQDSPAGGQTRDFLGVGVQAICHPSSINGWI
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagaacatcatggcagcagaagaagcaataactagtagttataatggttctgtc
gaaaatcctgttggtggatccaatccccctgctctaaagaagaagagaaaccttccagga
acaccagatcctgaagcagaagtcatagctttatcaccaaaaactctcatggccaccaac
agattcttgtgtgaaatatgtggtaaagggtttcaaagggatcaaaatctacaactccat
aggagaggacacaaccttccatggaagctgaagcaaaggacaaataatgaagtaagaaag
cgcgtttatgtctgccctgaaaagacctgtgtccaccatcatccctctagggctcttgga
gacttaacaggtataaagaagcacttttgtaggaagcatggtgagaagaaatggaagtgt
gaaaaatgttcgaagagatatgctgtccagtcagattggaaagcacactcaaagacttgt
ggcactagggaatacaaatgtgactgtgggactctattttcaaggagagatagcttcatc
actcatagggccttctgtgatgccttagcagaggaaacagcaagagtaaatgcagtatct
agcataagaaacttaactgctggcaacatcagttatcatctaccggggaacccattaggg
cctaacatggcacaacatttctcttcaattttcaagccaatttcaagtaatgatcaccac
acaagacaaggaggactttccttgtggatgcaccaaggaggagtaccccatgtcagtgaa
gcaatgggcaataatattcaagagattcatcaaattggcgctatgactagttcaggagct
atatttggtgaccctcttgctgtttcatgctcaagtactccaccatctgatcattatcag
ttaaattggccagtgtttggaaacaagatctcttcaaataatgctcacgaggagctgaca
agcactttagtacttcctttaagcaatgttaaggaagcagctgctgcaagtcagctagta
agtgttccttcattgtacagtacccaacaacaacaatcccatcaaacaacttcagcaaat
atgtcagccactgctttgctgcaaaaagctactcagattggtgcaacctcaacagatcca
tcattccttgggagttttgggctaaagagcttcagtactaaagctcaagatgggaacaac
aagttctgtggactgtatggttcaagccctataagcactaacccagcaagtgatatggaa
aactcaggaaatgatgagattcccactttgaatcagcttcaaatgtattctgctaaaagg
cagaaaatatttcaaagtgatcaagatagccctgcaggagggcaaactagagactttctt
ggtgttggtgtacaagccatatgccacccatcgtctatcaatggatggatttaa
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integrated database retrieval system