KEGG   Populus trichocarpa (black cottonwood): 18100839
Entry
18100839          CDS       T01077                                 
Name
(RefSeq) zinc finger protein NUTCRACKER
  KO
K25870  zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
pop  Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:pop00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pop03000]
    18100839
Transcription factors [BR:pop03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    18100839
SSDB
Motif
Pfam: C2CH-4th_BIRD-IDD C2H2-2nd_BIRD-IDD C2CH-3rd_BIRD-IDD zf-C2H2 zf-C2H2_4 zf-C2H2_STOP2_C zf-C2H2_6 zf-met zf-C2H2_jaz
Other DBs
NCBI-GeneID: 18100839
NCBI-ProteinID: XP_006380280
UniProt: U5G9H1
LinkDB
Position
7:14731717..14734703
AA seq 477 aa
MSENIMAAEEAITSSYNGSVENPVGGSNPPALKKKRNLPGTPDPEAEVIALSPKTLMATN
RFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTNNEVRKRVYVCPEKTCVHHHPSRALG
DLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYKCDCGTLFSRRDSFI
THRAFCDALAEETARVNAVSSIRNLTAGNISYHLPGNPLGPNMAQHFSSIFKPISSNDHH
TRQGGLSLWMHQGGVPHVSEAMGNNIQEIHQIGAMTSSGAIFGDPLAVSCSSTPPSDHYQ
LNWPVFGNKISSNNAHEELTSTLVLPLSNVKEAAAASQLVSVPSLYSTQQQQSHQTTSAN
MSATALLQKATQIGATSTDPSFLGSFGLKSFSTKAQDGNNKFCGLYGSSPISTNPASDME
NSGNDEIPTLNQLQMYSAKRQKIFQSDQDSPAGGQTRDFLGVGVQAICHPSSINGWI
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgtcagagaacatcatggcagcagaagaagcaataactagtagttataatggttctgtc
gaaaatcctgttggtggatccaatccccctgctctaaagaagaagagaaaccttccagga
acaccagatcctgaagcagaagtcatagctttatcaccaaaaactctcatggccaccaac
agattcttgtgtgaaatatgtggtaaagggtttcaaagggatcaaaatctacaactccat
aggagaggacacaaccttccatggaagctgaagcaaaggacaaataatgaagtaagaaag
cgcgtttatgtctgccctgaaaagacctgtgtccaccatcatccctctagggctcttgga
gacttaacaggtataaagaagcacttttgtaggaagcatggtgagaagaaatggaagtgt
gaaaaatgttcgaagagatatgctgtccagtcagattggaaagcacactcaaagacttgt
ggcactagggaatacaaatgtgactgtgggactctattttcaaggagagatagcttcatc
actcatagggccttctgtgatgccttagcagaggaaacagcaagagtaaatgcagtatct
agcataagaaacttaactgctggcaacatcagttatcatctaccggggaacccattaggg
cctaacatggcacaacatttctcttcaattttcaagccaatttcaagtaatgatcaccac
acaagacaaggaggactttccttgtggatgcaccaaggaggagtaccccatgtcagtgaa
gcaatgggcaataatattcaagagattcatcaaattggcgctatgactagttcaggagct
atatttggtgaccctcttgctgtttcatgctcaagtactccaccatctgatcattatcag
ttaaattggccagtgtttggaaacaagatctcttcaaataatgctcacgaggagctgaca
agcactttagtacttcctttaagcaatgttaaggaagcagctgctgcaagtcagctagta
agtgttccttcattgtacagtacccaacaacaacaatcccatcaaacaacttcagcaaat
atgtcagccactgctttgctgcaaaaagctactcagattggtgcaacctcaacagatcca
tcattccttgggagttttgggctaaagagcttcagtactaaagctcaagatgggaacaac
aagttctgtggactgtatggttcaagccctataagcactaacccagcaagtgatatggaa
aactcaggaaatgatgagattcccactttgaatcagcttcaaatgtattctgctaaaagg
cagaaaatatttcaaagtgatcaagatagccctgcaggagggcaaactagagactttctt
ggtgttggtgtacaagccatatgccacccatcgtctatcaatggatggatttaa

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