Populus trichocarpa (black cottonwood): 18100970
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Entry
18100970 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC18100970
KO
K20222
importin-5
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
18100970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pop03009
]
18100970
Ribosome biogenesis [BR:
pop03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
18100970
Pre-60S particles
18100970
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GFIT
Motif
Pfam:
IFRD
Importin_rep_6
Vac14_Fab1_bd
HEAT
Motif
Other DBs
NCBI-GeneID:
18100970
NCBI-ProteinID:
XP_024461482
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Position
7:10926304..10932533
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AA seq
576 aa
AA seq
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MSHIDTFVLSFQVQAAMATYHFVEYCTSNMLEPQFDEIISKLLRCLQKGKQLLKLWALSA
LAAIAKSSQDRFLEYYRTVMPYLKVVMTKAEGESNSKLLSATVSCITAIWTVFGKDKFGD
DTQQVVQLLVSTPISNLEIHDPMRIEGLRAWGRLCKCLGHKFQPYMEVAIPCLLQSARLT
LPDDANVEESDMKVPLLNFYEHAEVRIAAVLAMPEILKSSKAAIFEKRLLKKSPFEKLCS
DIIPALVEALVKEEVIKISAVMLDSLEDCLELSGPVLNIDQIKRFLSVIMDVLDTSISIP
KGDEASEQGEKVSKKVCACLKIFMKTYKGSLLQFFDQLLSRMEHMWVKDKTVKERKIALK
IFADVVEEFREEALKFCESELLLLFKACNDDEPEVQEVAAHGIGVAAAFGGSIFKPLVGE
AVSALNANISDSMALHRDYIMAHDAAVTALEQIYLFHKDRINASEVFSTWLSHLPIKNNL
LEVKIAHDLLCSIVEMQRTNFFAKILLVFPKSSLLLQSLWPLERHQILWADDETLATEET
VNRVIKQLRDFKSSSLFLVIMESLEIEQGFVMDTPV
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgtcacacatagatacatttgttctatcttttcaggtgcaagctgctatggcaacttat
cactttgttgagtattgcacttcaaatatgttagaacctcaatttgatgagattatcagt
aaattgctcagatgcctacagaaagggaaacaactattgaaactgtgggccttatcagca
ttagcagcaattgctaagtcatcacaggaccggtttctagagtattacagaacagttatg
ccttacctaaaagttgtgatgacgaaagcagaaggggaatctaacagcaagctcctttct
gcaactgtttcgtgcattacagcaatttggacggttttcggaaaggacaagttcggtgac
gatactcaacaggttgtgcaacttcttgtttccacacccatatcaaatctggagatacat
gacccaatgagaattgaagggttaagagcatggggcagactttgcaaatgcttaggccac
aagttccagccttatatggaagtagccattccttgtttgcttcaatctgcgcggctcact
ttgcctgatgatgctaacgttgaagaatcggatatgaaagttccacttctcaatttttac
gagcatgctgaggttagaatagctgctgtattagccatgcctgaaatactgaaatcgtcg
aaagcagcaatatttgagaaaaggcttcttaagaaatctccctttgaaaagttgtgttct
gatataataccagctttggttgaagcactggttaaggaagaagtcattaaaattagtgca
gtaatgttggattccttggaggattgcttggagttatcgggacctgttttaaatatagat
cagatcaagcgcttcttgtctgtaataatggacgttctcgacactagcatatccattccc
aaaggtgatgaagcgtcagagcaaggagaaaaagttagtaagaaagtttgtgcttgcttg
aagattttcatgaaaacttacaagggttccttgttgcaattcttcgaccagcttttatca
cgtatggaacatatgtgggttaaggataaaacagttaaagaaagaaaaattgccttgaag
attttcgctgatgttgtagaggaattccgagaagaagctttgaagttctgtgagagtgaa
ctcttgttgctatttaaagcttgcaatgatgatgaaccagaagttcaagaggttgctgca
catggaattggtgttgctgcagccttcggtggatctatcttcaaacctctggttggagaa
gcagtttctgctctaaatgctaacataagcgattcaatggcattgcaccgagattacata
atggcccatgatgctgctgttacagctctcgaacaaatatacctattccacaaggacaga
atcaatgcaagtgaggtgtttagtacatggttaagccatttgccaataaagaacaatcta
ctggaagtcaaaattgcacatgatctgctgtgttcaatagttgagatgcaaaggacgaac
ttcttcgctaagattttgcttgtcttcccaaaatcatcgctgcttttgcagagtctctgg
cctttggaaagacatcagatactatgggctgatgatgaaactttagcaacagaggaaacc
gtcaaccgagtgattaaacagttgagggactttaagagcagttctttattcctggtcatc
atggagtcccttgagattgagcaaggatttgtcatggatactcctgtttga
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