Populus trichocarpa (black cottonwood): 18101054
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Entry
18101054 CDS
T01077
Name
(RefSeq) aconitate hydratase 1 isoform X1
KO
K01681
aconitate hydratase [EC:
4.2.1.3
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00020
Citrate cycle (TCA cycle)
pop00630
Glyoxylate and dicarboxylate metabolism
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
pop01200
Carbon metabolism
pop01210
2-Oxocarboxylic acid metabolism
pop01230
Biosynthesis of amino acids
Module
pop_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
pop_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
18101054
00630 Glyoxylate and dicarboxylate metabolism
18101054
Enzymes [BR:
pop01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.3 aconitate hydratase
18101054
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Gene cluster
GFIT
Motif
Pfam:
Aconitase
Aconitase_C
HypD
Acyl_transf_2
Motif
Other DBs
NCBI-GeneID:
18101054
NCBI-ProteinID:
XP_006380559
UniProt:
B9N915
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Position
7:complement(6499505..6506724)
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AA seq
899 aa
AA seq
DB search
MANENPFKSILKTLEKPGGEFGKYYSLPALNDPRIDRLPYSIKILLESAIRNCDEFQVKS
KDVEKIIDWENTSPKLVEIPFKPARVLLQDFTGVPAVVDLACMRDAMSNLGGDSNKINPL
VPVDLVIDHSVQVDVSRSENAVQANMEFEFHRNKERFAFLKWGSNAFQNMLVVPPGSGIV
HQVNLEYLGRVVFNTNGLLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSM
VLPGVVGFKLSGKLRDGVTATDLVLTVTQMLRKHGVVGKFVEFYGEGMSELSLADRATIA
NMSPEYGATMGFFPVDHVTLQYLKLTGRSDGTVSMIESYLRANKMFVDYSEPQIDRVYSS
YIALNLRDVEPCISGPKRPHDRVPLREMKADWHACLDNKVGFKGFAIPKESQSKVAEFNF
HGTPAQLRHGDVVIAAITSCTNTSNPSVMLGSALVAKKACELGLEVKPWIKTSLAPGSGV
VTKYMEKSGLQKYLNQLGFHIVGYGCTTCIGNSGDIDEAVASAITENDVVAAAVLSGNRN
FEGRVHPLTRANYLASPPLVVAYALAGTVDIDFETEPIGVGKDGKKIFFRDIWPSNDEVA
QVVHSSVLPDMFKATYQAITKGNPMWNQLSIPSGTLYDWDPKSTYIHEPPYFKSMTMSPP
GPHGVKDAYCLLNFGDSITTDHISPAGSIHKDSPAARYLMERGVDRRDFNSYGSRRGNDD
VMARGTFANIRIVNKLLGGEVGPKTIHFPTREKLSVFDVAMRYKSEGHDTVILAGAEYGS
GSSRDWAAKGPMLLGVKAVMAKSFERIHRSNLVGMGIIPLCFKSGEDAETLGLTGHERYS
LDLPSNVSEIRPGQDVTVVTDNGKQFTCTLRYDTEVELAYFDHGGILQYAIRNLIHTKH
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatgaaaatcctttcaagtctatattgaagacactagagaaacctggtggtgaa
tttggcaagtactatagcttgcctgctctcaatgaccccagaattgatagattgccatat
tcgattaagatccttttggaatcggcgattagaaactgcgatgagtttcaggtcaagagt
aaggatgttgagaagattattgattgggagaatacttctcctaaactagttgaaattccg
ttcaagcctgcaagagtgcttcttcaggatttcactggtgttcctgctgttgttgacctt
gcctgcatgcgagatgcgatgagtaatctgggaggtgattctaataagatcaacccattg
gttccagttgatcttgttattgatcactcagttcaggttgatgtgtcaagatcagaaaac
gcagtgcaggcaaatatggagtttgagttccatagaaacaaagaaagatttgctttcctt
aaatggggttcaaatgctttccaaaacatgcttgttgttccgcctgggtctggtatagtt
caccaggtcaacttggaataccttgggagagtggtgttcaacacaaatggtttactttat
cctgatagtgttgttggaacagactcgcacactaccatgatagatggattaggtgttgct
ggctggggagttggcgggatagaagctgaggctgcaatgcttggccagcccatgagcatg
gtcctgcctggtgtggttggttttaagttatcaggaaaacttagagatggtgttacagcc
accgatttggtattgacagtaactcaaatgctgagaaagcatggggttgttggcaagttt
gtggagttctacggtgagggaatgagtgaattgtcactagcagaccgcgctactattgcc
aatatgtctcctgagtatggtgcaacgatgggtttctttcctgtggatcatgtcacgctg
caatatctgaaactgacaggcagaagcgatggaactgtctctatgatagaatcctattta
agagctaacaagatgtttgtggactacagtgagccccagattgacagagtgtactcttct
tatatagcattgaaccttcgggacgtggaaccttgtatatcaggacctaagaggccacat
gatcgagttcctttgagagaaatgaaagctgattggcatgcatgcttagacaacaaggtt
ggatttaagggatttgctataccaaaagaatctcaaagcaaggttgctgagttcaatttt
cacgggactccagcccaactgagacatggtgatgttgttatagctgctattactagttgc
acaaatacctcaaaccctagtgtcatgcttggatctgctttggttgcaaagaaagcttgt
gaactaggattggaggtgaaaccatggattaagacaagtcttgctccaggttctggggtt
gtaaccaaatacatggaaaagagtggcttgcagaaatatctgaatcagctagggtttcat
attgttggttatggatgcaccacttgcattgggaattctggagatatagatgaagctgtg
gcatcagctatcactgaaaatgatgtagtggctgctgctgtgttgtctgggaataggaat
tttgagggtcgtgtccatcctttaacaagagctaattatcttgcttcgcctccacttgtg
gtagcctatgcacttgctggaacggtggatattgattttgaaacagagccaattggtgta
ggaaaagatggaaagaagatatttttcagggatatctggccttctaatgacgaagttgct
caagttgtccattcaagtgtgctacctgatatgtttaaggctacatatcaggcaatcacc
aagggaaatcccatgtggaatcaattatccattccttcgggcactctgtatgattgggac
cccaaatcaacttacatacatgagccaccatatttcaaaagcatgactatgtctcctcca
ggaccacatggtgtgaaggatgcttactgcttactcaactttggggacagtattacaact
gatcacatttcaccagctggcagcatccacaaggacagtcctgctgctagatacctcatg
gaacgaggggttgatagaagggacttcaattcgtatggaagtcgtcgtggtaatgatgac
gtgatggcaaggggcacatttgctaacattcgaattgtcaacaaactattgggaggagaa
gttgggcctaaaacaattcattttcccactagagagaaactatctgtgtttgatgttgcc
atgaggtacaagagtgagggacatgatacagttattttggctggtgctgagtatgggagt
ggaagttctcgtgattgggctgccaagggtccaatgctactgggtgtgaaagcagtgatg
gccaagagctttgagcgaattcatcgcagtaatttggtgggaatgggtatcattccactt
tgtttcaagtccggggaggatgctgagacacttggcttaactgggcatgagcgctacagc
cttgatcttcctagcaacgtgagtgagattagaccaggtcaagatgttacagtggtgaca
gacaatggcaagcaatttacatgtaccttgcgttatgatacagaggtggaactggcttat
tttgatcatggaggcattctgcaatatgccatcagaaacctgattcacaccaaacattga
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