Populus trichocarpa (black cottonwood): 18101089
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Entry
18101089 CDS
T01077
Name
(RefSeq) cold shock protein 1
KO
K09250
cellular nucleic acid-binding protein
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
18101089
Transcription factors [BR:
pop03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
18101089
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
CSD
zf-CCHC_5
zf-CCHC_3
OB_RNB
zf-CCHC_4
zf-CCHC_2
EcoRI
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
18101089
NCBI-ProteinID:
XP_006380594
UniProt:
U5G7X6
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All DBs
Position
7:complement(5980963..5982127)
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AA seq
243 aa
AA seq
DB search
MAEEQAADVAADVAATKEERSTGRVVRFSDKKGFGFIKPDVGDKDLFVHHSAIKSDGGYR
TLYEDDVVEFTILLTEDKYQAIEVTAPGGGPIKRRTTTSGGFSRRNNNNNNNGVGCFNCG
NPGHIARDCNNNSSKSYNNYNNNNNNRGADFGCYKCGSSGHFARECTKGNNNGCYSCGGI
GHVARDCPGGSGACYNCGGYGHLARDCTSARVTGGGRFGGGNSGGCFNCGNEGHFARDCP
EQS
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggagcaagcggcagatgtggcggcagatgtggcggcgacaaaggaggagaga
tcgaccggcagggtggttcgattcagcgacaagaaaggatttggattcataaaacctgat
gttggcgacaaagatctcttcgttcaccactccgccatcaaatctgacggtggctaccgt
actctttacgaagacgacgtcgttgagttcactattttactgactgaagacaagtatcaa
gctattgaagttactgcccccggtggcggacctatcaaacgccgcaccaccacctccggt
ggtttcagccgccgcaacaacaacaacaacaacaacggtgttggctgtttcaattgtggg
aatcctggccatattgcgagggattgcaacaataacagtagtaagagttacaataattac
aacaacaacaacaacaatcgcggtgccgattttggttgctataagtgtggtagcagtggg
cattttgcgagggagtgcacgaaggggaataacaatggatgttacagttgtggagggatt
gggcatgtggcaagggactgtccgggtgggagtggagcttgttataactgcggtgggtat
gggcatttggctagggattgcaccagtgcaagagtaactggtggtggaaggtttggcggt
ggtaatagtggtggatgttttaattgtggtaatgaagggcactttgctagggattgtcct
gagcagtcttga
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