Populus trichocarpa (black cottonwood): 18101160
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Entry
18101160 CDS
T01077
Name
(RefSeq) probable indole-3-acetic acid-amido synthetase GH3.1
KO
K14487
auxin responsive GH3 gene family
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
18101160
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Motif
Pfam:
GH3
GH3_C
GH3_M
AIG2_2
Motif
Other DBs
NCBI-GeneID:
18101160
NCBI-ProteinID:
XP_006380674
UniProt:
B9NAE1
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Position
7:4840289..4842679
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AA seq
597 aa
AA seq
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MAIESVLSPLGPPACEKDAKALQFIEDMTANVDLVQERVLKEILTSNAETEYLQKYHLNG
ATDRDSFKSKIPMVTYEDLQPQIQRIANGDKSPILSSHPISEFLTSSGTSAGERKLMPTI
EEEMDRRQLLYSLLMPVMNLYVPGLDKGKGLYFYFIKAEAKTPGGLVARPVLTSYYKSKQ
FKTRPYDPYNVITSPNETILCVDSFQSMYSQMLCGLIMREEVLRVGAVFASGLLRAIRFL
QLNWKELANDISTGSLNPKVTNPSIRECMAKILKPNQELAEFITKECSDENWERIITRIW
PNTKYLDVIVTGAMAQYIPTLDYYSGGLPKPCTMYASSECFFGLNLRPMSEPSEVSYTIM
PNMGYFEFLPHDPSAPAFSRESPPRLLDLADLEVGKEYELVITTYSGLNRYRVGDILLVT
GFYNKAPQFRFVRRKNVLLSIESDKTDEAELQKAIDNASLLLREFNTSVVEYTSYAETKI
IPGHYVIYWELLVKDPANSPTEEVLNQCCLAMEESLNSVYRQSRVADNSIGPLEIRVVKN
GTFEELMDYAISRGASINQYKVPRCVSFTPIMELLDSRVVSKHFSPSVPHWTPERRS
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggctattgagtcagtattgtcaccgctaggtcctcctgcatgcgaaaaagatgctaaa
gctcttcagtttattgaagatatgacagcaaatgtagacctagtgcaagagagggttctg
aaagaaatactcactagcaatgccgagactgaatatcttcaaaaataccatctcaacgga
gctactgatagggatagtttcaagtccaaaattcctatggttacctatgaggatctccaa
cctcagatccaacgtattgctaatggtgacaagtctcccatcctgtcctctcaccctatt
tctgagttcctaaccagctctggtacttctgcaggtgaaagaaaattgatgccaacaatt
gaagaagaaatggatcgtcgtcagctattgtacagtcttctcatgcctgtcatgaacctc
tatgtaccgggtttggacaaaggaaaaggtctttacttctattttatcaaggcggaagca
aaaactcctggtgggctagtggcacgtcctgtgctcactagctactacaagagcaaacaa
ttcaaaaccagaccctatgacccttataatgttatcacaagccccaacgagacaattcta
tgtgtagattccttccagagtatgtactctcaaatgttgtgtggcctgattatgcgagaa
gaagtgcttcgggttggtgctgtgtttgcatctggccttcttagagccattcgattcctt
caactcaactggaaagagcttgccaatgatatctccactggcagcttaaaccctaaagtt
acaaacccttcaataagagaatgtatggccaaaatcctgaaacctaaccaagaacttgct
gagttcatcaccaaagagtgctcagatgaaaattgggaacgtattatcactagaatttgg
cccaacacgaaatatcttgatgtgattgtcactggagctatggctcaatacattcccact
ctggattactatagtggtggcttgccaaagccttgcactatgtatgcttcatctgagtgc
ttttttgggcttaacctgaggccgatgagcgaaccatcagaggtttcttatacgattatg
ccaaacatgggttactttgagtttttgcctcacgatccctcagctccagccttctctcgt
gaatcacctcctcgtctcctggaccttgctgatcttgaagttggcaaggaatacgaactt
gtgatcactacttattcgggcctcaatcggtaccgagtaggtgatatccttttagtcact
gggttctacaacaaggctccacagtttcgatttgtgaggagaaagaatgtcttattgagc
atcgagtcggacaagaccgatgaggctgagttgcaaaaggccattgacaatgcatccttg
ttgttacgtgagttcaacactagtgttgttgagtacactagttatgcagagaccaaaata
attccaggtcactatgtgatttattgggagttgctcgttaaggatccagctaattcgcca
actgaggaggttttgaaccaatgttgtctagccatggaagagtcactaaattcagtttat
agacaaagtcgagttgctgataactctattggaccactagagataagggtggtaaagaac
ggaacttttgaagagctgatggattatgcaatttcaaggggtgcatctattaatcagtac
aaggtaccaaggtgtgttagcttcactcctatcatggaattgcttgactctagagtggtg
tccaagcatttcagtccatctgtgccgcattggaccccagaaagacgaagttga
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