KEGG   Populus trichocarpa (black cottonwood): 18101509
Entry
18101509          CDS       T01077                                 
Name
(RefSeq) zinc finger protein BRUTUS isoform X1
  KO
K16276  zinc finger protein-like protein
Organism
pop  Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:pop00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pop04121]
    18101509
Ubiquitin system [BR:pop04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    18101509
SSDB
Motif
Pfam: Hemerythrin zinc_ribbon_6 zf-CHY zf-RING_2 zf-RING_5 zf-RING_11 DUF5868
Other DBs
NCBI-GeneID: 18101509
NCBI-ProteinID: XP_006379749
LinkDB
Position
8:complement(8012641..8023103)
AA seq 1246 aa
MATPFSGIDRGGAGGVAVMAGPLNPIDPSTPSKTCLKSSALKSPILIFLFFHKAIRSELD
GLHSAAIAFATTGGDIEPLLERYHFFRSIYKHHCNAEDEVIFPALDIRVKNVARTYSLEH
EGESVLFDQLFELLDLNMQSEEIYRRELASRTGALQTSIDQHMSKEEEQVFPLLIEKFSF
EEQAFLVWQFLCSIPVNMMTEFLPWLSSSISTDEQQDMHMCLYKIIPEEKLLRQVIFSWM
KGTKLSDTCKSCEDNSKACCQDSGAPTLECQSMKRHCACESSGVGKRKYMELNCDAIIST
EFHPINEILLWHNAIKRELNDITEAARSIQLSGDFSNLSSFNKRLQFIAEVCIFHSIAED
KVIFPAVDAELSFAHEHAEEEIQFDKLRCLIESIQSAGAHTSLTDFYTKLCSQADQIMDS
IQKHFQNEEVQVLPLARKHFSAKRQRELLYQSLRVMPLKLIECVLPWLVGSLSEEEARSF
LQNMYMAAPASDSALVTLFSGWACKGRSKNVCLSSSATGFCPVRILAGTEEVTKQRFCPC
NSRSSVGDEPSLVQADGADDSRRPGKCGNLVVREDNNACPSTEPVDTQKSSCSNNSCCVP
GLGVNTNNLGISSLAVAKSLRSSFSPSAPSLNSSLFNWEMDTSPTNIGCSSRPIDNIFQF
HKAIRKDLEYLDVESGKLNDCNETLLRQFTGRFRLLWGLYRAHSNAEDEIVFPALESKET
LHNVSHSYTLDHKQEEKLFEDISSALSELTQLHEYMKNTNHADDLIGKCADSSDCNDSVR
QYNELATKLQGMCKSIRVTLDQHVFREELELWPLFDRHFSVEEQDKIVGQIIGTTGAEVL
QSMLPWVTSALTQEEQNRMMDTWKQATKNTMFSEWLNEWWEGTSAATPLKTASESCISLG
NDLHASLDQSDHTFKPGWKDIFRMNQNELEAEIRKVSRDSTLDPRRKAYLIQNLMTSRWI
ASQQKSPQARTGDHSNGGDLLGCSPSFRDPDKQVFGCEHYKRNCKLRATCCGKLFACRFC
HDKVSDHSMDRKATSEMMCMRCLRIQPVGPVCTSVSCGGFSMAKYYCSVCKFFDDERAVY
HCPFCNLCRVGTGLGVDFFHCMKCNCCLAMKLADHKCREKGLETNCPICCDDMFTSSASV
KALPCGHFMHSTCFQAYTCSHYICPICSKSLGDMSVYFGMLDALLASEELPEEYRDRCQD
ILCNDCDKKGTAPFHWLYHKCRLCGSYNTRVIKVDSTDSNCTTLNQ
NT seq 3741 nt   +upstreamnt  +downstreamnt
atggcgacgccattttctggtatagacagaggtggagcaggaggagtagcggtaatggca
ggtccattgaatccaatcgatccttcaacaccgtctaaaacttgcctgaaaagttcggct
ttgaaatctccaattcttatcttccttttcttccataaagctattaggtccgagctcgat
ggcctccacagcgccgccatcgcttttgctactactggtggcgatattgagccgttactt
gagcgatatcacttttttcgctcgatatataagcatcactgcaatgctgaggacgaggtt
atctttcctgctcttgatatccgtgtgaagaatgtggcacggacttactcccttgaacat
gagggggagagtgttctttttgatcaattatttgagctgcttgatttaaatatgcaaagt
gaagaaatctatcggagagagttagcctctcgtacaggagcccttcaaacatcaattgat
cagcatatgtcaaaggaagaggaacaggtctttcccttgcttattgagaagttttcattt
gaagagcaggctttcctggtatggcagtttctgtgcagcattcctgttaatatgatgaca
gagtttcttccttggctttcttcctctatatcaactgatgaacaacaagatatgcacatg
tgcttgtacaagataatcccagaagagaaacttctccggcaggttattttctcctggatg
aaagggacaaaattgtctgatacgtgtaagagttgtgaagataattctaaagcctgttgt
caagattcaggagcaccaactttagagtgtcaaagcatgaaaagacactgtgcatgtgaa
tcttctggagtgggtaaaaggaaatatatggagctaaattgtgatgctatcatttccact
gaattccatccaataaatgaaattctgctctggcacaatgccattaaaagagagttgaat
gatataactgaggcagctaggagcatacagctttcgggagatttttctaatctgtcttca
ttcaacaagaggctgcaattcattgcagaagtttgcatctttcacagtattgctgaggac
aaggttatattccctgctgtagatgcagagctctcttttgcccatgaacatgcagaagaa
gaaattcagtttgacaagcttaggtgcctgatagaaagcattcaaagtgctggagcccac
acatctcttactgatttctatacaaagttgtgctcccaagctgatcaaatcatggacagc
atacagaaacacttccaaaatgaggaagttcaggttcttccacttgctcgaaagcacttt
agtgccaaaagacagcgtgaacttctttatcaaagcttgcgtgtgatgcccttgaaattg
attgaatgtgtcttaccatggttggtagggtcacttagtgaagaggaagcaaggtctttt
cttcaaaatatgtacatggcagctccagcttcagattctgcattggttacacttttttct
ggttgggcatgtaagggtcgttctaaaaatgtttgtttgtcttcaagtgccactggtttt
tgtcctgtgagaatcttggctgggaccgaggaagttaccaagcagcggttctgtccatgc
aactctcggtcatctgttggtgatgagccttccttggtgcaagcagatggagctgatgac
tctagaaggccgggcaaatgtggaaacttggtagttcgggaagacaacaatgcttgtccc
tctacagagcctgttgatacccaaaaatcatcttgtagtaataattcttgttgtgtccct
gggttaggagtaaataccaacaatctgggaattagttctcttgctgtggccaaatctcta
cgctcatcttttagcccttctgctccttcccttaactccagccttttcaactgggaaatg
gacacaagccccaccaatattggttgctcatcacggcctattgataacatattccaattt
cataaagccatccgcaaagacctggagtatttagatgttgaatctggaaaactaaatgat
tgcaatgaaactttgctgaggcagtttactggtagatttcgtttgttgtggggtttgtat
agagctcatagtaatgcagaggatgaaatagtattccctgcattagaatctaaagagaca
cttcataatgttagccattcttacactctggaccacaagcaggaggagaagttatttgaa
gatatctcctctgcactttcagagcttactcagcttcatgaatacatgaagaatacaaat
catgctgatgatttaattggaaagtgtgctgattcgtctgattgtaatgattctgttaga
cagtataatgagcttgcaacaaagcttcaggggatgtgcaaatccattagagtaactctg
gatcaacatgttttccgggaagaacttgagttgtggccattatttgacaggcatttttcc
gtagaggagcaggacaaaattgttggtcaaataattggcaccactggtgcagaggtgctt
caatcgatgttgccatgggtaacatctgctctcacccaggaggagcagaacaggatgatg
gacacgtggaagcaggcaaccaaaaatacaatgtttagcgagtggcttaatgaatggtgg
gaaggaacttctgctgcaacaccacttaaaacagcatcagagagttgtatttcactaggt
aacgatctccatgcaagtctggatcaaagtgatcatacatttaagcctgggtggaaagat
atttttcggatgaatcaaaatgagctagaagccgagattaggaaagtttctcgagattca
actcttgatccaagaagaaaagcttatcttattcaaaatcttatgactagccgctggata
gcttctcagcagaagtcacctcaagcaagaactggtgaccattcaaatggtggagactta
cttggatgttctccttcatttcgagatccagataaacaagtatttgggtgtgagcattac
aaaagaaattgtaaattacgtgctacttgctgtggcaagttatttgcatgtaggttctgc
catgataaagtcagtgaccattcgatggataggaaggctacatctgaaatgatgtgtatg
cgctgcctcagaattcagcctgttggaccagtttgcacctctgtttcctgtggtgggttc
tcaatggcaaagtactattgcagtgtctgcaaattttttgatgatgaaagggctgtttat
cattgccctttctgcaatttatgccgtgtgggaactggtcttggtgttgacttctttcat
tgcatgaaatgcaattgttgcctggcaatgaaactagctgaccacaagtgtcgagagaaa
ggtctggaaacaaattgtcccatctgctgtgatgacatgttcacttcaagtgcaagcgtc
aaagctcttccctgcggtcatttcatgcattcaacttgttttcaggcatacacttgcagt
cactacatctgcccaatttgtagcaaatctctgggagacatgtcggtttactttggtatg
cttgatgcactattggcttctgaggagcttccagaagagtaccgggatcgctgtcaggat
atattgtgcaatgactgtgacaagaagggcacagcaccttttcattggctataccacaag
tgtaggttgtgtgggtcatacaataccagggtaattaaggttgattcaacagattcaaac
tgcacaactttgaaccagtga

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