Populus trichocarpa (black cottonwood): 18101535
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Entry
18101535 CDS
T01077
Name
(RefSeq) sodium/hydrogen exchanger 8 isoform X1
KO
K14726
solute carrier family 9 (sodium/hydrogen exchanger), member 10/11
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pop02000
]
18101535
03037 Cilium and associated proteins [BR:
pop03037
]
18101535
Transporters [BR:
pop02000
]
Solute carrier family (SLC)
SLC9: Na+/H+ exchanger
18101535
Cilium and associated proteins [BR:
pop03037
]
Motile cilia and associated proteins
Sperm associated proteins
18101535
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Na_H_Exchanger
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
18101535
NCBI-ProteinID:
XP_006379797
UniProt:
U5G5K6
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All DBs
Position
8:9474444..9494788
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AA seq
1145 aa
AA seq
DB search
MGSAIEKGVGLPYRIWESSSSSSAASDEWNPTDTVLFFGLSLLLGIACRHLLRGTRVPYT
VALLVVGIALGSLEYGTSHQLGRIGDGIRLWAHIDPDLLLAVFLPALLFESSFSMEVHQI
KRCMVQMLLLAVPGVLISTCCLGCALKLIFPYNWSWTTSLLLGGLLSATDPVAVVALLKE
LGASKKLSTIIEGESLMNDGTAIVVYQLFYRMVLGESFTSGAIIKFLTQVSLGAVGIGIA
FGIASVLWLGFIFNDTVIEIALTLAVSYVTYFTAQEGAAVSGVLAVMTLGMFYAAVARTA
FKGDGQQSLHHFWEMVAYIANTLIFILSGVVIAEGVLSSGNTFHSHGHTWGYLFLLYIFV
QLSRFIVVGALYPFLRYFGYGLDWKEATIVIWSGLRGAVALSLSLSVKRTSDSSIYLSSD
TGTLFVFFTGGIVFLTLIVNGSTTQFILHLLDMDKLSATKKRILNFTKYEMLNKALEAFG
DLGEDEELGPVDWPTVKRYITSLNNLEGSCEHPHGASEADNNLDPTNLKDIRIRLLNGVQ
AAYWGMLDEGRITQTTANILMQSVDEAIDLASHEPLCDWKGLQSNVHFPNYYKFLQASIF
PQKMVTYFTVERLESACYICAAFLRAHRIARRQLHDFIGDSGIASIVINESDAEGEEARK
FLEDVRVTFPQVLRVVKTRQATYSVLNHLIDYVQNLEKVGLLEEKEMLHLHDAVQTDLKR
FLRNPPLVMLHKITDLISAHPLLGALPSMVREPLERSSKEIMKPRGVPLYKEGSKPNGVW
LISSGVVKWTSKSVRSKHSLHPTFTHGSTLGLYELLVGKRCICDIITDSVVLCFFIESEK
ILSLLGSDPAVEDFLWQESAIVIAKLLLPQVFEKMPMQELRALVAERSVMTTYIRGETIE
IPHHSIGFLLEGFIKAHGFQDELTASPAVLLPPQGNQSFQKIGISGAQAASFSHQGSRYQ
VEARARVIIFDIAAFEADGALRRRSSSLVSVDHPHRSFTREHGGLMSWPENLYKPREREQ
NCVGTCRSENSLSVRAMQLSIFGSMVDMRRHAHSFSGSQVKRSHSLSVLRTASYQQVRVP
SEEATYARKSLEVRKLIGKTHAPPLQSTGTNETCIIDNYSDESDAEDELVVRIDSPSRLS
FHHAS
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atggggagtgcgatagaaaaaggagtaggtttaccgtacagaatatgggagtcctcttct
tcttcatctgctgcttcagatgaatggaatccaacggacactgtgcttttctttgggtta
agtctgctgcttgggattgcgtgcaggcatttgttgagaggcacccgagtcccttacact
gttgctcttctcgtcgtcggcattgctcttggatccttagaatatggtaccagtcatcaa
ctgggaaggattggggatggaattcggctctgggcacatattgatcctgaccttttactg
gctgttttccttcctgcccttcttttcgagagttccttttcaatggaagtccaccaaatt
aagaggtgcatggtgcaaatgcttctacttgctgttcctggagttctaatttcgacatgt
tgtcttggatgtgctttgaagctcattttcccatataactggagttggacaacctctttg
ttgctcgggggacttctgagtgctactgatcctgtggctgttgttgctctgttgaaagag
cttggtgcaagcaaaaaattgagtacaataatcgaaggagaatccctgatgaacgatggg
acagcaattgtggtctatcagctattctatcggatggtccttggggagagctttacctcg
ggtgccataatcaaatttctaactcaagtttcgcttggagctgtaggcattggtattgct
tttggaattgcatctgttttgtggctcgggttcatcttcaatgacacagtgatagagatt
gcgctgacactagctgtgagctacgttacttacttcactgctcaagagggtgctgctgtt
tctggcgttttggcagtgatgactttaggaatgttttatgctgcagtagccaggactgct
ttcaagggtgatggccaacagagcttgcatcatttttgggaaatggttgcttatattgca
aatacattaattttcatcttaagtggtgttgttatagcagaaggtgttctgagcagtggc
aatacttttcatagccatgggcatacatggggctacctatttcttctatacatttttgtg
caactatcccggttcatagttgttggagcattgtatccatttttacgatattttggttat
ggtttggattggaaggaagctaccattgtcatatggtcaggtcttcgaggggctgttgca
ttatcactttcattatctgttaagcgcactagtgacagctcaatttatctcagttctgat
acaggaaccttgtttgttttcttcactggcggaatcgtatttctgacgcttattgtgaat
gggtcaactacgcagtttattttacatcttctagatatggataagttatcagctaccaag
aagcgtatattgaacttcacaaagtatgaaatgttgaacaaagcactagaggcttttggt
gatcttggggaggacgaggaacttggacctgttgactggcctacagttaaaagatacatt
acaagcttaaataatttggaagggtcatgcgaacaccctcatggtgcatctgaagctgat
aataatttagacccaactaatctgaaagatattcgcatacgccttctaaatggagttcag
gctgcttattgggggatgcttgatgagggaaggataacacaaacaactgcaaacattttg
atgcaatcagtagatgaagcaatcgacttggcttcccatgaacctctatgtgattggaag
ggcttgcaatccaatgttcattttccaaattattacaagttccttcaagcaagcattttc
cctcaaaaaatggttacttatttcactgtagagaggcttgaatctgcatgctacatttgt
gctgcatttctacgtgcccatagaattgcacggagacaactacatgactttattggtgac
agtggtattgcttctatagtcattaatgaaagtgatgcagaaggagaagaagcaagaaag
ttcttggaagatgttcgtgttacatttcctcaggttttgcgtgttgtgaaaacaagacaa
gcaacatattcagtgctgaaccatttaattgattatgtccaaaatcttgagaaggttggg
ttattggaagaaaaggaaatgcttcatcttcatgatgctgtccagactgacttgaaaaga
tttctaaggaatcctcctttagtaatgcttcacaaaataactgacttgattagtgcccat
cctctgctgggggcccttccttctatggtgcgtgaaccccttgaacgttcttccaaagaa
ataatgaaaccacgtggtgtgcccctttacaaagaaggctccaaaccaaatggtgtctgg
ctaatttccagtggtgttgtcaagtggacaagcaagagcgttaggagcaaacactcattg
catccaacttttacacatgggagcacactagggctgtacgaactgctagttgggaaacgt
tgcatatgtgacataataacagattctgtggtactctgcttttttattgaaagcgagaaa
atactttctctgctagggtcagaccctgcagttgaagatttcctgtggcaggaaagtgca
atcgttattgccaaactcttgcttcctcaagtatttgaaaaaatgccaatgcaagaattg
agagcccttgtagcagaaaggtcagtgatgaccacatacatcaggggagaaactatagaa
atacctcatcattctattggctttctattagaaggattcataaaagcccatggtttccaa
gatgaattgactgcgtcgcctgcagtacttttgcctccacaaggaaatcaaagctttcaa
aagatagggatatcaggtgcccaagcagccagtttctctcatcaaggatcccggtatcaa
gttgaggcaagagcgagggtaatcatttttgatattgcagcatttgaagcggatggtgct
ttgaggagaagatcatcgtcattggtatcggttgatcacccccacagatctttcactaga
gagcatggtggtcttatgagctggcctgaaaatttgtacaaaccaagggaacgtgaacag
aactgtgtagggacttgtcgatcagaaaatagcttgtctgtgagagcaatgcagctaagc
atatttggcagcatggttgacatgcggaggcatgcccacagcttttccggtagccaagtc
aagcgatcacacagcttgtcagttttaagaaccgcatcgtaccagcaagttcgtgtccca
tcagaagaagctacttatgctaggaagagtcttgaagtgaggaagttgattggaaaaact
catgctcccccactgcagagtacaggcacaaatgagacttgtatcattgataattacagt
gatgaatctgatgctgaagatgaattggtggtaagaattgattcgcctagtaggctgtcg
ttccatcatgcttcttag
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integrated database retrieval system
