Populus trichocarpa (black cottonwood): 18101591
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Entry
18101591 CDS
T01077
Name
(RefSeq) actin-related protein 9 isoform X1
KO
K11673
actin-related protein 8
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
18101591
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pop03036
]
18101591
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
18101591
INO80 complex (yeast)
18101591
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
18101591
NCBI-ProteinID:
XP_006379879
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Position
8:complement(11369865..11380947)
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AA seq
591 aa
AA seq
DB search
MDYLKTVIPSQLVADRGSNLVVINPGSANIRIGLAPQDAPLNIPHCIARYTNQRPKFNLQ
DQMLNSQVTTAQHMEREKAYDTIASLLKIPFLDEEVANNSFPRKIGRADGYNPQSGRSVA
FQWANVYEQDAGSSLALGTSKSKGITGESVEKHEGTGAEEIYSGNHKFRGHIFGEEALRI
SPTEPYCLSRPIRRGHFNISQHYPLQQVLEDMHAIWDWILIEKLHIPHSERNMYSAVLVL
PETFDNREIKEMLSIALRDLRFSSAVVHQEGLAAVFGNGLSTACIVNMGAQVTSVVCIED
GVALPNTEKTLPFGGEDISRCLLWTQRHHQTWPQIRTDMLTKPIDLLMLNRLKESYCGIK
EGELDAVAVVHSYEDGMPAGSHKTRLTALNVPPMGLFYPTLLIPDIYPPPPRSWFHDYEN
MLEDTLHMEYSRRPDMSDGLFPGISVGYPMWESYPIFSSKPKKEEKVGLAEAITSSILST
GRIDLQRKLFCSIQLIGGVALTAGVIPAVEERVLHAIPPNEAIDTVEVLQSRTNPTFVPW
KGGAILGILDFGRDAWIYREDWIHNGIHFRSGRKYKDSYYLQAQATCYINS
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggattacttgaagacggtaattccttctcagctcgtcgccgaccgaggctccaattta
gtagtcatcaatccaggctctgcaaatatcagaataggattagctccacaagatgctccc
ttaaatattcctcactgcattgctcgttacaccaatcaacgtcccaaattcaatctccaa
gaccagatgctgaattctcaggtcacaacagcacagcacatggaacgcgagaaggcttat
gatacaatagcgtcgttattgaagataccttttctagatgaagaggttgcgaacaattcg
ttcccgcgcaagatagggcgtgctgatggatacaatccacagagtggcaggagtgtggct
tttcagtgggctaatgtatacgagcaggacgcaggttcctctttggcattaggaacatca
aaaagtaaaggtataactggtgaatctgtggagaagcatgaaggcactggtgctgaggag
atatattctgggaaccacaaattcagaggacacatttttggtgaagaagcacttagaatc
tccccaacagagccatactgcttaagccgtcctattcgcagaggtcatttcaacatttca
caacattatcctttgcagcaggtgcttgaggacatgcatgctatttgggattggatattg
atagagaaactgcacatccctcactcagaaagaaacatgtattctgcagttcttgttttg
ccagaaacatttgataatcgcgaaataaaggaaatgttgtctatagcattacgtgacttg
cgctttagctcagcagtagtacaccaggaaggtcttgctgcagtttttgggaatgggtta
tcaacggcatgcatagttaatatgggtgctcaggtgacatctgtagtttgcattgaggat
ggagtggctttacctaatacggaaaagactttgccttttggtggagaggatatatcaaga
tgccttctctggacccagaggcatcatcagacatggccccaaattcggactgacatgttg
acaaagcctatagatttgttgatgcttaatagactgaaagagtcctattgtggaatcaag
gagggggagcttgatgctgttgctgtagttcattcttacgaggatggcatgcctgctgga
tctcacaaaactcgactaactgctcttaatgtgcctcccatgggtctgttctaccccacg
cttttaattccagatatatatccaccaccacctcgttcttggttccatgactatgagaat
atgctagaagacacattgcatatggaatattctagaaggcctgacatgtcagatggttta
tttcctggcattagtgttggatatccaatgtgggagagctatccaattttttcttctaag
ccaaagaaagaagagaaggttggccttgctgaagctatcactagtagcattctttccact
ggtcgtatagacctccagagaaagttgttttgcagcatacaattgattggtggagtggct
ttgacagctggtgttattcctgctgtggaggaaagagttttacatgcaattcccccaaat
gaagcaattgatactgttgaggttctacagtcaagaacaaatccaacttttgtgccttgg
aaaggcggagcaatccttggaattcttgattttggtcgcgatgcatggatttaccgggag
gattggattcacaatgggatccattttcgaagtggcagaaaatacaaggactcttactat
cttcaagcacaagcaacatgttacataaactcttag
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