Populus trichocarpa (black cottonwood): 18101833
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Entry
18101833 CDS
T01077
Name
(RefSeq) cullin-1 isoform X1
KO
K03347
cullin 1
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04120
Ubiquitin mediated proteolysis
pop04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
18101833
04120 Ubiquitin mediated proteolysis
18101833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
18101833
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Cullin
18101833
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GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
18101833
NCBI-ProteinID:
XP_006380173
UniProt:
B9N515
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Position
8:16294311..16302804
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AA seq
744 aa
AA seq
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MAINERKTIDLEQGWEFMQKGITKLKNILEGLQEPQFSSEDYMMLYTTIYNMCTQKPPHD
YSQQLYDKYRESFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDR
YFIARRSLPPLNEVGLTCFRDLVYQELNGKVRDAVISLIDQEREGEQIDRALLKNVLDIF
VEIGMGQMDYYENDFEAAMLKDTAAYYSRKASNWILDDSCPDYMLKAEECLKREKDRVSH
YLHSSSEPKLLEKVQHELLSVYATQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGL
DPVSGIFKQHVTAEGTALVKQAEDAASNKKADKKDVVGLQEQVFVRKVIELHDKYLAYVN
DCFQNHTLFHKALKEAFEVFCNKGVAGSSSAELLATFCDNILKKGGSEKLSDEAIEETLE
KVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGM
VTDLTLARENQTSFEEYLSNNPNANPGIDLTVTVLTTGFWPSYKSFDLNLPAEMVKCVEV
FREFYQIKTKHRKLTWIYSLGTCNLIGKFEQKTMELIVTTYQASALLLFNSSDRLSYSEI
MTQLNLTDDDVVRLLHSLSCAKYKILNKEPNTKIISPTDHFEFNSKFTDKMRRIKIPLPP
VDEKKKVIEDVDKDRRYAIDASIVRIMKSRKVLGHQQLVMECVEQLGRMFKPDFKAIKKR
IEDLITRDYLERDKENPNLFRYLA
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggcgataaatgagcggaagactattgatcttgaacaaggatgggagtttatgcaaaag
ggaattactaagctgaagaacatcctagaagggttgcaagagccgcagttcagctccgag
gactacatgatgctatacacaaccatttacaacatgtgtacgcagaagccccctcatgat
tattcccagcagctatacgacaaataccgggagtcttttgaagaatacattacttcaacg
gtattgccatcgttaagggagaagcatgatgagtttatgttaagagagctagttaaaagg
tgggcaaaccataaagtcatggttcggtggctttctcgtttcttccattaccttgaccgc
tatttcattgcccggaggtcacttccaccacttaatgaagttggacttacttgcttccgt
gatctggtgtaccaggaactgaatgggaaagtgagggatgctgtaatttctctgattgat
caagagcgtgaaggagagcagattgacagagctttattgaagaatgttttagatatattt
gttgaaattggaatgggacagatggattactatgaaaatgactttgaagcagcgatgctt
aaagatacagctgcttattattctcggaaggcatcaaactggatccttgatgattcttgt
ccagattacatgctaaaggctgaggagtgtctaaaacgggagaaagatagggtttctcat
tacttgcattccagtagtgagccaaaattgcttgagaaagttcaacatgagttgttgtct
gtatatgccacccaactgcttgaaaaagagcactctggatgccatgctttgcttagagat
gacaaggtggaggatttatcaagaatgttcaggctcttttctaaaatacctcgaggctta
gatcctgtttctggtatatttaagcagcatgtcactgctgaaggtacagctttggtcaaa
caggctgaagatgcagcaagcaataagaaggcagataaaaaggatgtggttggtttgcaa
gaacaggtttttgtcaggaaggtgattgagctgcatgacaaatatctggcatatgtcaat
gattgtttccagaaccacactctcttccacaaggccctcaaggaagcttttgaggtcttt
tgcaacaagggtgttgctggaagttcaagtgcagaattactagcaaccttttgcgataac
attcttaagaaaggtgggagtgagaaactgagtgatgaggccattgaggaaacactggag
aaggtggtcaagctgcttgcttatattagcgacaaggacctgtttgcagaattttatagg
aaaaaacttgctcggcggcttctttttgataagagtgcaaatgacgaccatgagagaagc
attttgacaaagctgaaacagcaatgcggtgggcaattcacctcaaagatggaggggatg
gttacggatttgacattagcacgtgaaaaccaaaccagttttgaggagtatctaagcaat
aacccaaatgcaaatcctgggattgacttgacagttactgttttgacaactggcttctgg
cctagttacaagtcttttgatctgaaccttccagcagagatggtcaagtgtgttgaagtt
tttagggaattttatcaaataaaaacaaagcacaggaaacttacctggatatactctttg
ggtacttgtaatcttatcggaaaatttgaacaaaaaaccatggagttgattgtgacaacc
taccaggcatctgcactgttactttttaactcctcagatagattaagttattccgagatc
atgactcaattgaacttgaccgatgatgatgttgttagactgctccactcgctgtcatgc
gcgaagtataagattctaaacaaagagccaaatacaaaaataatatctcctactgatcac
tttgaattcaactccaaatttactgacaaaatgaggaggatcaagattcctctgcctcct
gtagatgaaaagaagaaagtaattgaagatgttgacaaggatagaaggtatgctattgat
gcctcaattgtgcgcatcatgaagagtcgcaaagttttgggtcaccagcaattggttatg
gagtgtgttgagcagttgggccgcatgttcaagcctgatttcaaggcaattaaaaaacgg
attgaagatctgattactcgagactatcttgaaagggacaaagaaaacccgaacttgttc
agatacttggcataa
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