KEGG   Populus trichocarpa (black cottonwood): 18101833
Entry
18101833          CDS       T01077                                 
Name
(RefSeq) cullin-1 isoform X1
  KO
K03347  cullin 1
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop04120  Ubiquitin mediated proteolysis
pop04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    18101833
   04120 Ubiquitin mediated proteolysis
    18101833
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pop04121]
    18101833
Ubiquitin system [BR:pop04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Cullin
     18101833
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 18101833
NCBI-ProteinID: XP_006380173
UniProt: B9N515
LinkDB
Position
8:16294311..16302804
AA seq 744 aa
MAINERKTIDLEQGWEFMQKGITKLKNILEGLQEPQFSSEDYMMLYTTIYNMCTQKPPHD
YSQQLYDKYRESFEEYITSTVLPSLREKHDEFMLRELVKRWANHKVMVRWLSRFFHYLDR
YFIARRSLPPLNEVGLTCFRDLVYQELNGKVRDAVISLIDQEREGEQIDRALLKNVLDIF
VEIGMGQMDYYENDFEAAMLKDTAAYYSRKASNWILDDSCPDYMLKAEECLKREKDRVSH
YLHSSSEPKLLEKVQHELLSVYATQLLEKEHSGCHALLRDDKVEDLSRMFRLFSKIPRGL
DPVSGIFKQHVTAEGTALVKQAEDAASNKKADKKDVVGLQEQVFVRKVIELHDKYLAYVN
DCFQNHTLFHKALKEAFEVFCNKGVAGSSSAELLATFCDNILKKGGSEKLSDEAIEETLE
KVVKLLAYISDKDLFAEFYRKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGM
VTDLTLARENQTSFEEYLSNNPNANPGIDLTVTVLTTGFWPSYKSFDLNLPAEMVKCVEV
FREFYQIKTKHRKLTWIYSLGTCNLIGKFEQKTMELIVTTYQASALLLFNSSDRLSYSEI
MTQLNLTDDDVVRLLHSLSCAKYKILNKEPNTKIISPTDHFEFNSKFTDKMRRIKIPLPP
VDEKKKVIEDVDKDRRYAIDASIVRIMKSRKVLGHQQLVMECVEQLGRMFKPDFKAIKKR
IEDLITRDYLERDKENPNLFRYLA
NT seq 2235 nt   +upstreamnt  +downstreamnt
atggcgataaatgagcggaagactattgatcttgaacaaggatgggagtttatgcaaaag
ggaattactaagctgaagaacatcctagaagggttgcaagagccgcagttcagctccgag
gactacatgatgctatacacaaccatttacaacatgtgtacgcagaagccccctcatgat
tattcccagcagctatacgacaaataccgggagtcttttgaagaatacattacttcaacg
gtattgccatcgttaagggagaagcatgatgagtttatgttaagagagctagttaaaagg
tgggcaaaccataaagtcatggttcggtggctttctcgtttcttccattaccttgaccgc
tatttcattgcccggaggtcacttccaccacttaatgaagttggacttacttgcttccgt
gatctggtgtaccaggaactgaatgggaaagtgagggatgctgtaatttctctgattgat
caagagcgtgaaggagagcagattgacagagctttattgaagaatgttttagatatattt
gttgaaattggaatgggacagatggattactatgaaaatgactttgaagcagcgatgctt
aaagatacagctgcttattattctcggaaggcatcaaactggatccttgatgattcttgt
ccagattacatgctaaaggctgaggagtgtctaaaacgggagaaagatagggtttctcat
tacttgcattccagtagtgagccaaaattgcttgagaaagttcaacatgagttgttgtct
gtatatgccacccaactgcttgaaaaagagcactctggatgccatgctttgcttagagat
gacaaggtggaggatttatcaagaatgttcaggctcttttctaaaatacctcgaggctta
gatcctgtttctggtatatttaagcagcatgtcactgctgaaggtacagctttggtcaaa
caggctgaagatgcagcaagcaataagaaggcagataaaaaggatgtggttggtttgcaa
gaacaggtttttgtcaggaaggtgattgagctgcatgacaaatatctggcatatgtcaat
gattgtttccagaaccacactctcttccacaaggccctcaaggaagcttttgaggtcttt
tgcaacaagggtgttgctggaagttcaagtgcagaattactagcaaccttttgcgataac
attcttaagaaaggtgggagtgagaaactgagtgatgaggccattgaggaaacactggag
aaggtggtcaagctgcttgcttatattagcgacaaggacctgtttgcagaattttatagg
aaaaaacttgctcggcggcttctttttgataagagtgcaaatgacgaccatgagagaagc
attttgacaaagctgaaacagcaatgcggtgggcaattcacctcaaagatggaggggatg
gttacggatttgacattagcacgtgaaaaccaaaccagttttgaggagtatctaagcaat
aacccaaatgcaaatcctgggattgacttgacagttactgttttgacaactggcttctgg
cctagttacaagtcttttgatctgaaccttccagcagagatggtcaagtgtgttgaagtt
tttagggaattttatcaaataaaaacaaagcacaggaaacttacctggatatactctttg
ggtacttgtaatcttatcggaaaatttgaacaaaaaaccatggagttgattgtgacaacc
taccaggcatctgcactgttactttttaactcctcagatagattaagttattccgagatc
atgactcaattgaacttgaccgatgatgatgttgttagactgctccactcgctgtcatgc
gcgaagtataagattctaaacaaagagccaaatacaaaaataatatctcctactgatcac
tttgaattcaactccaaatttactgacaaaatgaggaggatcaagattcctctgcctcct
gtagatgaaaagaagaaagtaattgaagatgttgacaaggatagaaggtatgctattgat
gcctcaattgtgcgcatcatgaagagtcgcaaagttttgggtcaccagcaattggttatg
gagtgtgttgagcagttgggccgcatgttcaagcctgatttcaaggcaattaaaaaacgg
attgaagatctgattactcgagactatcttgaaagggacaaagaaaacccgaacttgttc
agatacttggcataa

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