Populus trichocarpa (black cottonwood): 18101895
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Entry
18101895 CDS
T01077
Name
(RefSeq) phospholipase D zeta 1 isoform X1
KO
K01115
phospholipase D1/2 [EC:
3.1.4.4
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00564
Glycerophospholipid metabolism
pop00565
Ether lipid metabolism
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
pop04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
18101895
00565 Ether lipid metabolism
18101895
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
18101895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
18101895
Enzymes [BR:
pop01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
18101895
Membrane trafficking [BR:
pop04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
18101895
Endosome - Golgi transport
Others
Others
18101895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLDc
PLDc_2
PH
Motif
Other DBs
NCBI-GeneID:
18101895
NCBI-ProteinID:
XP_024463027
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All DBs
Position
8:complement(17690608..17704930)
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AA seq
1150 aa
AA seq
DB search
MASSAQLMGGGSVGGGGPRYVQMQSEPSTPLQPPSSSIISSFFSFRQGSTPESGRIFDEL
PQATIVSVSRPDPSDISPVQLSYTIEVQYKQFKWRLLKKAAQVFYLHFALKKRVFFEEIL
EKQEQVKEWLQNLGIGDHTPMVNDDDDADDETIPLHHDESAKNRDVPSSAALPVIRPALG
RQNSMSDRAKVTMQQYLNHFLGNMDIVNSREVCKFLEVSKLSFSPEYGPKLKEEYVMVKH
LPRIVKDDDSRKCCACSWFSCCNDNWQKVWAVLKPGFLALLADPFDTKLLDIIVFDVLPA
SDGSGEGRVSLAAEIKERNPLRHGFKVACGNRSIDLRSKNGARVKDWVATINDAGLRPPE
GWCHPHRFASFAPPRGLSEDGSQAQWFVDGRAAFEAIALSIEDAKSEIFICGWWLCPELY
LRRPFRAHASSRLDSLLEAKAKQGVQIYILLYKEVALALKINSVYSKTKLLSIHENVRVL
RYPDHFSTGVYLWSHHEKLVIVDHQICFIGGLDLCFGRYDTCEHRVGDCPPQVWPGKDYY
NPRESEPNSWEDMMKDELDRGKYPRMPWHDVHCALWGPPCRDVARHFVQRWNYAKRSKAP
YEEAIPLLMPQQHMVIPHYMGQNREMEVERKGIKDDVKGIKRQDSFSSRSSLQDIPLLLP
QEAEGPDDSGVGPKLNGMDSTPGRSLPHAFWKSKIELVVPDISMTSFVDNNGSDLHVKMS
SDFSAQPGTKASDLEWWETQERVDQVGSPDESGQVGPRVSCHCQVIRSVSQWSAGTSQIE
ESIHCAYCSLIEKAEHFVYIENQFLISGLSGDDIIRNRVLEALYRRIMRAFNDKKCFRVI
IVIPLLPGFQGGVDDGGAASVRAIMHWQYRTICRGQNSILHNLYDHLGPKTHDYISFYGL
RSYGRLFDGGPVATSQVYVHSKIMIIDDRTTLIGSANINDRSLLGSRDSEIGVLIEDKEL
VDSLMGGKPRKAGKFTLSLRLSLWSEHLGLHSKAINKVIDPVIDSTYKDIWMSTAKTNTM
IYQDVFSCVPNDLIHTRYDTSLIISPTMLSNWVRARALTDCFLSPNTRRAALRQSMVSRK
DRLGHTTIDLGIAPQKLESYQNGDIKNTDPLERLQSTRGHLVSFPLEFMCKEDLRPVFNE
SEYYASQVFH
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgtcagcgcaattaatgggaggggggagtgttggcggcggcggtccccgttac
gtacaaatgcaatcagagccatcaacgccgttacaaccaccatcatcctcaatcatatct
tccttcttctctttccgtcaaggttcgacaccggaatccggccggattttcgatgaatta
ccacaagctactattgtatccgtctctcgacccgaccccagcgatattagtcctgttcaa
ttatcttatactatcgaagttcaatataagcagttcaagtggagattattgaagaaagcg
gcacaagtgttttatttacattttgcattgaagaaacgggtgtttttcgaggaaattctt
gagaagcaagagcaggttaaagaatggcttcaaaatctaggaataggagatcatacacca
atggttaatgatgatgatgatgccgacgatgagaccattccattgcatcatgatgagagt
gccaaaaacagagatgttccatcaagtgctgctttaccagttatccgtccagcgttggga
agacagaattcaatgtcggaccgtgcaaaggttacaatgcaacaatatttaaaccacttt
ttagggaacatggatattgtgaactcccgagaggtttgcaagtttttggaggtctctaag
ctgtcattttcaccagaatatggccctaagctgaaagaagaatatgttatggtgaagcat
ctaccacgaatagtgaaggatgatgattccaggaaatgttgtgcttgcagttggtttagt
tgctgtaatgacaactggcagaaggtgtgggctgttttgaaaccaggattcttggcactg
ctggctgatccttttgataccaagcttttggatataattgtttttgatgtattacctgct
tcagatggaagtggtgaaggccgagtgtcattagcagcggaaataaaggagcggaatcct
ttacgacatggttttaaggttgcatgtggaaacagaagcatagacttgagatctaaaaat
ggtgctagagttaaagattgggttgctacaattaatgatgctggacttaggcctcctgag
ggttggtgtcatcctcatcgttttgcctcttttgctcctcctagaggtttgtctgaagat
ggtagtcaggcccagtggtttgtagatggtagggcagcttttgaagccattgctttatca
attgaggatgctaaatctgagatatttatttgtggctggtggctgtgcccagagctttat
ctacgacgtccttttcgtgctcatgcctcctctagacttgattctttgctggaagccaaa
gctaaacaaggggttcagatatatattcttctctataaagaggtggctcttgctctgaaa
attaatagtgtctatagcaagacaaagcttcttagtatccatgagaatgtgagagtgctg
cgctatcctgaccacttttctacaggtgtttacctttggtcccaccatgaaaagcttgtc
attgttgatcaccagatttgctttattggaggactggacttgtgctttggtcgttatgac
acttgtgaacacagagtgggtgactgccctcctcaagtatggccaggaaaggattattat
aatccaagggaatctgaaccaaattcatgggaagatatgatgaaagatgaactggatcgt
ggcaaatatcctcgcatgccttggcatgatgtccattgtgctctttggggaccaccttgc
cgtgatgtagctaggcactttgtacagcgttggaactatgccaagagaagtaaagctcca
tatgaagaagctattccactacttatgcctcagcagcacatggttattccacactatatg
gggcaaaacagagagatggaagttgaaagaaagggtatcaaagatgatgtaaaaggaatc
aaacggcaagattcattttcatctagatcatctttacaagacatccctcttcttttgcct
caggaagctgaggggcctgatgattctggtgtaggtccaaaattaaacgggatggactct
acccctggcagaagccttccacatgctttttggaaatccaaaattgaattggttgttcca
gatatttcaatgacaagcttcgtagataacaatggctcagatcttcatgtgaaaatgtca
tcagatttctcggcgcagcctggcaccaaagcttcagacttggagtggtgggaaacacaa
gaaagggttgatcaggttggttctccagatgaaagtggccaagttggtcctcgtgtttct
tgtcattgtcaggtcataaggagtgtgagtcagtggtctgctggaacaagccaaattgaa
gagagtattcactgtgcttattgttctcttattgagaaagcagagcactttgtctacatc
gagaatcaatttcttatatcaggtctttcaggagatgatattatacggaatcgtgtgtta
gaagctttgtatcggcgtattatgcgagcatttaatgataagaaatgtttcagggtcata
attgtcataccgctgcttccaggtttccagggtggtgtagatgatggtggtgcagcatct
gtcagagccataatgcattggcaatatcgaactatttgcagaggacagaattcaatattg
cataatctttatgatcatctcggtcccaagacacatgattacatttctttctatggcctt
agatcttatggtcgactttttgatggtggtcctgtggccactagtcaggtgtatgtccat
agtaaaatcatgataatagatgaccgtacaaccttgattggatcagccaatatcaatgac
aggagtctgcttgggtcacgagattctgagattggggtacttattgaagacaaagagtta
gtggactcgttaatgggagggaagcctcggaaagctggaaaatttactcttagtcttcgc
ctttcattgtggtctgaacaccttggtcttcattccaaagcgatcaataaagtaattgac
ccagtaattgattcaacctacaaagacatatggatgtcaactgcaaagacaaataccatg
atctaccaggacgtcttctcttgcgtgcctaatgatcttatacataccaggtatgatact
tcacttatcatctcccctaccatgctctctaattgggtgcgtgcacgcgcgctaactgat
tgctttctgtccccgaacacccgcagagccgcgctcagacaaagcatggtgtcccggaag
gataggcttggtcacaccaccatcgatttagggatagccccccaaaagcttgaatcttac
caaaacggagacataaaaaacaccgatccactggagagattacagtcgacgcgaggacat
cttgtttctttccctttggagttcatgtgcaaggaagacttaagacctgtgtttaatgag
agcgagtattacgcgtcccaagtttttcattaa
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