Populus trichocarpa (black cottonwood): 18102027
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Entry
18102027 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC18102027 isoform X2
KO
K09527
DnaJ homolog subfamily C member 7
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pop03110
]
18102027
Chaperones and folding catalysts [BR:
pop03110
]
Heat shock proteins
HSP40 / DNAJ
18102027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
DnaJ
TPR_2
TPR_8
TPR_12
TPR_19
TPR_7
TPR_14
TPR_11
TPR_6
BTAD
TPR_16
CATRA-N
TPR_9
Motif
Other DBs
NCBI-GeneID:
18102027
NCBI-ProteinID:
XP_006379059
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All DBs
Position
9:complement(5549058..5558849)
Genome browser
AA seq
1297 aa
AA seq
DB search
MNPSNFGNLNSGFSNSTQFSNQDPNFSSRSSSAKGGLSRPRLVKVRRQSNPQNFNANEDI
WARSGFNPFRPDTSRVELGGSGSTGFDSGSGGNEAFLFGASGSNVGFNSDSSKGIIEDLK
SLRIGGGTNVNENDKSGFVFSSDGNKSFGVDESMQKLSIDDKEKVVDGESKLSANARFES
GDNVGGSIGRNVGSVLSDELEKKLNIEEAGDATNGGGSFRAEDIKKFGLKSSEKRSDIFA
DASENALPDRIKKLSIRDFVDTYNVNNEKDSFAFGSRESTGGYVGGENESILSRERGCKL
NLGSVKGEYSSQTDMRFSSSRIFMPTVNKGDEKFHDCGDPTEFVFEGGMLGTDVGGFQVP
IDQPKVDAQPIGVAGPSHAFSSSSLAGGNAFRVPPTGGLEKTDWFSFTSKQDSAGSLFVE
FETPNPKGYIFTGSNPTMEFSTMFKDLKVKKKRGKLSQPVKVPLWPGQDFVDREGGSKEI
PEASESYSPMDISPYQETLSDARNSRETSVASEESFTLDNQHQSTDSQPAVLNDAIDEDL
VVATQQMDNEEDTKYGETKEQNSEYCSDKNIGAENYLEESISGAETESFKSANEEIDSIN
DVMVASAESEASSSANLDSDLRTQFFSAVSSEDAVSSGFTFAASSTAQASPKRHHKKKNL
AKVDNDSFNSSANSKGSYASSSLQFTPFSGPSSPLSPVRSKKAGSSGPSHVVGDTRELLR
GQEINQGSVSASVAAQEACEKWRIRGNQAYTSGDLSKAEDCYTKGVNCVSKTETSRSCLR
ALMLCYSNRAATRMSLGRMRDALLDCKMAAAIDPNFLRVQVRAANCYLALGEVEDAVQYF
KRCLRLGIDVRVDQKTAVEASDGLQKAQKVSECMQHAALLLKRGAPNDAESALQVIAEGL
LISSYSEKLLEMKAESLFMLRKYEELIQLCEHTFDSAKKNSPPLHADYHVENLGPELTKG
TSFMIWRCRFIFKSYFHLGRLEEAIVSLEKQEELTSIARSLSRNDIETQESLVPLAATVQ
ELLRHKAAGNEAFQAGKHSEAIEHYSAALSRNIESRPFAAICFCNRAAAYKALRQITDAI
ADCSLAIALDGNYLKAISRRATLYEMIRDYGQAANDLQRVVAILIKQAEEKTKHFGHSDR
TTNLANDLRQAHLRLSTIEEEARKEIPLNMYLILGIEPSASASEVKKAYRKAALRHHPDK
AGQSLARSDNVDDGLWKEIGEEVHKDADRLFKMIGEAYAMLSDPAKRSQYDLEEAMRNDP
KKRSGSSTYRTHTEAQNYPFESSSRRHWKGVWRSHGR
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
atgaatccatcaaattttggtaatttaaattccgggttttcaaactcaacccaatttagc
aaccaagatccaaactttagctctcgatcatcgtcagccaaaggtggtctttcgaggcca
agattggtaaaagttaggaggcaatcaaatccccagaactttaatgccaatgaagatatc
tgggctaggtctggtttcaatccgtttcgacctgatacgagtcgtgttgaactgggcggt
tctggttcaactgggtttgattctgggagtggtggtaatgaggcgtttttgtttggagct
agtggaagtaatgtgggttttaattcggattccagcaagggaattatagaggacttgaaa
agtttgagaattggaggtggaactaatgtaaatgagaatgataagagtggttttgttttt
tcgagtgatggtaataagagttttggtgttgatgagagcatgcagaagctgagcattgat
gataaggagaaagttgtagatggagagtctaagttaagtgcaaatgctaggtttgagagt
ggtgacaatgtaggcggttctattgggagaaatgtggggtcagtgctatcagatgagtta
gagaagaaattgaatattgaagaggccggggatgccactaatggtggtggtagttttcga
gctgaagatatcaaaaagtttggattaaaaagtagtgaaaagcgtagtgatatttttgct
gatgcttcagagaatgcacttcctgatcggatcaagaaattgagcataagggactttgta
gatacttataatgtaaacaatgagaaggatagctttgcttttggaagcagggaaagcact
ggcggttatgtgggtggagaaaatgagagtatactttcacgtgagaggggttgcaagttg
aacctcggaagtgtgaagggagaatattcaagtcaaactgacatgagattttcttcatca
cgaatcttcatgccaactgtaaataagggggatgagaaattccatgattgtggtgatcca
acggaatttgtttttgaaggaggaatgctgggtacagatgttggtggctttcaagtacct
atagatcaaccaaaagtcgatgcacaaccaattggagttgcagggccatcgcatgccttc
tcatccagtagcttggctggtgggaatgcgttcagggtgccacctactggtggacttgag
aagacagattggtttagttttacaagcaagcaagacagtgctgggtctctatttgtagaa
tttgaaacaccaaatcccaaaggatatattttcacaggatcaaatccgacaatggaattc
agtacgatgtttaaagacttgaaagtgaagaagaaaaggggaaagttgagccaacctgtc
aaagtccctctgtggccaggtcaagattttgttgatagggaaggtggttcaaaagaaatt
ccagaggcttccgaatcttattcaccaatggatatttcaccataccaggaaacattgtct
gatgctcgaaattccagggaaacttctgttgcatcggaggaatctttcactctggataat
caacatcaatcaactgattcacaaccagctgttctgaatgatgcaatagatgaagatctg
gttgttgcaacacagcaaatggataatgaagaggatacgaaatacggagaaactaaagag
caaaactctgaatactgttctgataaaaatattggagctgaaaattatctggaagagtct
atttctggggctgaaactgaaagctttaaatctgcaaatgaggaaatagattctatcaat
gatgttatggttgcttcagcagaaagtgaagccagttcaagtgcaaatctagatagtgac
ctcaggacacaatttttttcagctgtgagttcagaagatgctgtgagttcgggcttcacc
tttgctgcctcttctactgcacaagcatctccaaaacgtcatcacaaaaagaagaatctg
gctaaagttgataatgattccttcaattccagtgctaattccaaaggttcatatgcatca
tcttctttgcaatttacaccattttctggaccatcttcacccttgtcccctgtacggagc
aagaaagctggctcatctggtccttcacatgtggttggggatacccgtgagctgcttaga
ggacaggagattaatcaagggtctgtttctgcatctgttgcagctcaagaagcatgtgag
aagtggcgaataaggggaaaccaagcatacactagcggggatttgtctaaagctgaggat
tgttacacaaaaggtgtaaattgtgtttctaaaactgagacatctagaagctgtctcagg
gcattgatgttgtgctatagcaaccgtgcggctacccgtatgtctcttggaagaatgaga
gacgcactattagactgtaagatggctgctgcaattgatcccaattttctcagggtgcaa
gtcagagctgcaaattgttaccttgctctgggggaagttgaagatgcagtgcaatatttc
aagaggtgcttacggttaggcattgatgtccgtgtggaccaaaaaactgctgtagaagcc
tctgacgggctgcaaaaggcacagaaagtgtctgagtgcatgcaacatgctgctctactt
ctgaaacggggagcacctaatgatgcagagagtgctttacaagtaattgctgaggggttg
ttgataagttcgtattctgaaaaattacttgaaatgaaagcagagtcacttttcatgctg
cggaagtatgaagagttaattcaactgtgtgagcatacatttgattctgctaagaagaat
tctcctccattacatgctgattaccatgtagaaaatcttggtcctgaactcacaaagggc
acttcctttatgatctggcgatgccgcttcattttcaagtcttacttccatcttggaaga
ctggaggaggctattgtttcgctagaaaagcaagaggaacttacttctattgcaaggagt
ctgtccaggaatgatattgaaacacaggaatcactagtacccttagctgccactgtacaa
gaactcttacgccataaggcagcagggaatgaagcatttcaagcaggaaagcattcagaa
gctattgaacattacagtgctgctctgtcccgtaacatagaatcacggccttttgcagcc
atttgtttttgcaatagagctgctgcatacaaagcactgcgccaaatcactgatgctata
gcagactgcagcctggcaattgctcttgatggaaattatttgaaggcaatctctagacga
gccactttatatgagatgataagggattatggacaagcagctaatgatcttcagagagtg
gtagctattctcattaagcaagcagaggagaaaactaaacattttgggcactctgataga
acaacaaacttggcaaatgatctaagacaagctcacctacgtctctctaccatagaagaa
gaagccagaaaggagattcctctgaatatgtacctcattctgggaattgaaccttctgct
tcagcatcggaagttaagaaggcatatcgcaaagctgcacttagacaccatcctgacaag
gctggtcagtccttggcaagaagtgataatgtagatgatggcctgtggaaggagatagga
gaagaagtccacaaggatgctgacagactttttaaaatgattggagaggcatatgccatg
ctttcagaccctgctaagcgctcgcagtatgatcttgaagaagcaatgaggaatgaccca
aagaaacgaagtggaagcagcacatacagaacacatacagaagctcagaattatccattt
gaaagcagtagtaggagacattggaagggggtttggaggtcacatggtcggtaa
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