Populus trichocarpa (black cottonwood): 18102183 Help Entry 18102183          CDS       T01077                                  Name (RefSeq) protein HIRA isoform X1   KO K11293   protein HIRA/HIR1 Organism pop  Populus trichocarpa (black cottonwood) Brite KEGG Orthology (KO) [BR:pop00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:pop03036]     18102183 Chromosome and associated proteins [BR:pop03036]  Eukaryotic type   Nucleosome assembly factors    Histone chaperones     Other Histone chaperones and regulators      18102183 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Beta-prop_CAF1B_HIR1 Hira WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I ANAPC4_WD40 WDR55 Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR35_TULP_N Beta-prop_IFT122_1st Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_EML Beta-prop_ELP1_1st Beta-prop_IFT140_2nd Beta-prop_SCAP Motif Other DBs NCBI-GeneID:  18102183 NCBI-ProteinID:  XP_006379311 UniProt:  U5G0X0 LinkDB All DBs Position 9:11490341..11498275 Genome browser AA seq 1040 aa AA seqDB search MIAEKPSWVRHEGMQIFSIDIQPGGHRFATGGGDHKVRIWNMNSVSRNLEINEPTQRLLA TLRDHFGSVNCVRWAKHGRYVASGSDDQVILVHERKPGSGTTEFGSGEPPDVENWKVAMT LRGHTADVVDLNWSPDDSILASGSLDNTIHIWNMSNGICTAVLRGHSSLVKGVTWDPIGS FIASQSDDKTVIIWRTSDWSLAHRTDGHWAKSLGSTFFRRLGWSPCGHFITTTHGFQKPR HSAPVLERGEWAATFDFLGHNAPIIVVKFNHSMFRRNFTNAQELKAAQVGWTNGASKIGG KESQPYNVIAIGSQDRTITVWTTASPRPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGT VATFHFDAKELGHRLSDTELDELKRSRYGDVRGRQANLAESAAQLLLEASTKETTNKKAA LDIQQSQIPVKSSVDLGVTAKTSEAQVDDGKKSVGAAGDGLNKLPASARISSPVKQREYR RADGRKRIIPEALGVPNQPETMTGGAQSQALDFPLAASDHRKVENGIVPVDGGLRESSIR GTLGRNSDIKERSGVNARATVTESLVIEKVPGSAGGDGSINVQQSGIKASSSSGSCSTPL SIRVFDKKLGEDATPICLEARSREHAVNDVVGVGSTSMMKETEIVCTRGAETLWSDRISG KVTVLAGNTNFWAVGCEDGCLQVYTKCGRRAMPTMMMGSAATFVDCDECWKLLLVTRKGS LYVWDLFSRNCLLQDSLASLITSDPNSAKGTIKVISVKLSKSGSPLVVLATRHAFLFDMS LMCWLRVADDCFPASNFASSWNLSSIQSGELAALQVDVRKYLARKPSWSRVTDDGVQTRA HLEAQLESSLALKSPNEYRQCLLSYIRFLAREADESRLREVCESFLGPPTGMAESTSSDT KMVSWDPCVLGMRKHKLLREDILPAMASNRKVQRLLNEFMDLLSEYGSVETNQKTPVLPT TSQQATSQKNCDPPVTEQMDTAPQAIDHTNAAQPAKDHEDPTPIITDEADHIPLAIDEVD LCPMVTDQVIQDSLDREAGS NT seq 3123 nt NT seq  +upstreamnt  +downstreamnt atgattgcggagaaacccagttgggtcaggcatgagggaatgcaaattttctccattgat attcaacctggtggccacaggtttgctaccggcggaggtgatcacaaggttcggatatgg aacatgaactctgttagcaggaacttggaaattaacgaaccaacacaaaggcttcttgca actctccgcgaccacttcgggtcagtcaattgtgttagatgggctaagcatggtcggtat gttgcatctgggtctgatgatcaagtaattttagtgcatgaaaggaagcctggttcagga actacagagtttggcagcggagagcctcctgatgttgaaaattggaaagttgcaatgaca ttgagagggcacactgcagatgtggtggatcttaattggtctccagatgactccatattg gctagcgggagtttggacaacactatccatatctggaatatgagcaatggcatttgcact gctgttcttagaggtcactcgagcctggttaaaggagttacttgggatccaattggctct ttcatagcaagtcaatctgatgataagacagttattatatggcgaacaagtgactggagt ctggctcacagaacagatggccactgggctaaatcacttggatctacatttttcaggcgc ttaggatggtccccctgtggtcattttataactacaactcatggttttcagaagccaagg cattctgcacctgttctcgagagaggggaatgggctgccacatttgatttcttaggacac aatgcccccattattgtggtgaagtttaaccattcaatgtttagaagaaattttaccaat gctcaggaattgaaagctgcacaagttgggtggactaatggggcctcaaagattggaggg aaagaatcacagccatacaatgttattgcaattgggagtcaagatcgcactataactgta tggacgactgcaagtcctcgtcctctttttgtggccaagcacttctttactcaaagtgtt gtagatttatcctggagtcctgatgggtattctctttttgcatgttccttggatggtact gtggctactttccattttgatgctaaagaacttggacacaggctaagtgatactgaactt gatgagttaaaaagaagtcgttatggtgatgtcagaggtagacaggcaaacctagctgag agtgctgcacagttattgcttgaagcatcaaccaaagaaacaacaaataaaaaagcggca ttggatattcagcaaagtcaaatacctgtaaaatcttctgttgacttgggggtcactgca aagacttctgaggcacaagttgatgatggcaagaagagtgtgggagctgctggtgatgga ttaaataaattgcctgcttctgctcggatttctagtccagtaaaacaaagagaatacaga cgcgctgatggtagaaagagaatcattccagaagctttaggagtgcccaatcaaccggaa acaatgaccggcggggctcagtctcaagctcttgatttccctcttgcggcatctgatcac agaaaggttgaaaatggaatagttcctgttgatggtggcttgcgagagagttctatcagg ggaacacttggcagaaactctgatataaaagagcgctctggtgtcaatgcaagggctact gttactgagagcctggtcattgagaaggttccaggatctgcaggaggagatggaagcatt aatgtgcaacagtctgggataaaggcatctagttcctctggttcttgtagcacccctctc tcaattagggtatttgataagaaattaggggaagatgccacaccaatttgcttggaagct cgttctagagaacatgcagtgaatgatgttgttggggtggggagtacaagtatgatgaaa gaaacagaaattgtttgcacaagaggagctgaaactctttggtctgataggatctcagga aaagttactgttttagctggaaatacaaacttctgggcagttgggtgtgaagatggatgc ctacaggtttacacgaagtgcgggagacgtgccatgcccactatgatgatgggatctgca gcaacttttgttgattgtgatgagtgctggaagttgttgctggtcacaaggaagggctcc ttgtatgtatgggatctgtttagtcggaattgtctccttcaggattctttggcatctcta attacctcagacccaaactctgcaaaaggtacaatcaaagttatatctgtgaagttatca aaatccggttctcctcttgttgtcctggccacacgtcatgccttcctctttgacatgagt cttatgtgttggctgagagtggcagatgactgcttccctgcatcgaattttgctagctct tggaatttgagttcgattcagagtggtgagctagctgcattgcaggtggatgtgaggaaa tatttggccagaaaaccaagttggagcagagtgacagatgatggggtgcagacacgagct catttggaggctcagttggaatcctccttagctttaaagtcccctaatgaatatcgccag tgccttctatcttacatacgcttccttgcaagagaagcagatgagtctcgtttacgagaa gtatgcgagagctttcttggacctcctactgggatggctgaatctacatcttcagataca aaaatggtgtcttgggatccttgtgtgcttggaatgagaaagcacaaactcttaagagaa gatattcttcctgcaatggcatcaaacagaaaagtccaacgtttactaaatgagttcatg gatctcttgtctgaatatggaagtgtagaaactaaccaaaaaacccccgtgctacctact acatctcaacaagcaaccagtcaaaagaattgtgatccaccagtaacagagcaaatggac actgccccacaagcaatagatcatacaaacgctgcccaaccagcgaaagatcatgaggac ccaacccccattataactgatgaagcagaccatattccactggctattgatgaagtggat ttgtgcccgatggtaacagatcaagttattcaggattcacttgacagagaagctggttct tga

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