Populus trichocarpa (black cottonwood): 18102278
Help
Entry
18102278 CDS
T01077
Name
(RefSeq) probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00730
Thiamine metabolism
pop00900
Terpenoid backbone biosynthesis
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
Module
pop_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
18102278
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
18102278
Enzymes [BR:
pop01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
18102278
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
E1_dh
Transketolase_N
TPP_enzyme_C
Motif
Other DBs
NCBI-GeneID:
18102278
NCBI-ProteinID:
XP_006378082
UniProt:
U5G0H4
LinkDB
All DBs
Position
10:2543093..2547322
Genome browser
AA seq
721 aa
AA seq
DB search
MALSAFSFPAHVNSVTSLEHPQKFSLLSSHFLWRTDLLSQSLDKINQIHVKKRANGICAS
LSERGEYHSQRPPTPLLDTINYPIHMKNLSVKELKQLADELRSDVIFNVSKTGGHLGSSL
GVVELTVALHYVFNAPQDKILWDVGHQSYPHKILTGRRDKMHTIRQTNGLAGFTKRSESE
YDCFGTGHSSTTISAGLGMAVGRDLKGGTNKVVAVIGDGAMTAGQAYEAMNNAGYLDSDM
IVILNDNKQVSLPTANLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHE
LAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDLIAILKEVKSTKTTGPVLIHV
VTEKGRGYPFAERAADKYHGVAKFDPATGKQFKASPSTQSYTTYFAEALTAEAEADKDIV
AIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFLQRAY
DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTFMACLPNMVVMAPSDEAELFHM
VATATAIDDRPSCFRYPRGNGVGVQLPPGNKGVPLEVGKGRMLIEGERVALLGYGTAVQS
CLAAASLVERHGIRLTVADARFCKPLDHALIRSLAKSHEILITVEEGSIGGFGSHVVQFL
ALDGLLDGKLKWRPVVLPDRYIDHGSPADQLVEAGLTPSHIAATVFSILGQRREALEIMS
S
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggccctctctgcattttctttccctgctcatgtcaatagcgtcacaagtttagagcac
cctcaaaagtttagtcttctgtcttctcatttcttatggagaacagatctgctgtcccaa
tctttagacaagatcaatcagatacatgtcaagaaaagggcaaatgggatttgtgcatca
ctatcagaaagaggagagtatcattcacagagacctccaacgcctctcttggacaccata
aactatccaattcacatgaaaaatctatctgtcaaggagctaaaacaactagcagatgag
ttgcggtccgatgttatcttcaatgtttctaaaactgggggtcacttaggttctagcctt
ggtgttgtggagcttactgtggctcttcactacgtttttaatgcccctcaagacaagata
ctatgggatgttggccatcagtcttaccctcacaagatcctgactgggagaagagacaag
atgcatacaataagacagactaatggattagctggttttacaaagcggtcagagagtgaa
tatgattgttttggcactggtcacagctctaccaccatttcggctggcttgggaatggct
gtggggagagatttaaaaggagggacgaacaaggtagtcgccgttataggtgatggagcc
atgacagcaggacaagcttatgaagcgatgaacaatgcagggtacctagactctgatatg
attgttattcttaatgacaacaaacaagtttctttaccaactgccaacttagatgggccg
ataccacctgtaggagccttgagcagtgctctcagtaggctgcaatcaaacaggcctctc
agagaactaagggaggttgctaagggagttacaaaacaaatcgggggaccaatgcatgaa
ttggcagcaaaggttgatgaatatgctcgtggaatgatcagtggttctggatcaaccctc
tttgaagagcttggtctctactatattggccctgttgatgggcacaatatcgatgatctt
attgccattctaaaagaggttaagagtacaaaaacaacaggtccagtcctgattcatgtt
gtcactgagaaaggtcgggggtatccatttgccgagagagctgctgacaagtaccatgga
gtggccaagtttgatcccgcaactggaaagcagttcaaggcaagtcctagcacacagtct
tacacaacgtattttgcagaggctttaactgcagaagcagaggcagacaaagatattgtt
gcaattcatgctgccatgggaggagggacaggcttaaatctcttccttcgccgttttcca
acaagatgttttgatgtggggatcgcagaacagcatgctgttacttttgctgcaggactt
gcctgtgaaggtcttaaacctttttgtgcaatctactcgtctttcttgcagagggcatat
gaccaggtggtacatgatgtagatttgcagaaacttccagtaagattcgcaatggacaga
gctgggctggttggagcagatggtcccacacattgtggagcttttgatgtcactttcatg
gcatgcctccccaacatggtggttatggctccttccgatgaggcagagcttttccacatg
gttgctactgctactgctatagatgatcgtcctagttgtttccgctatccaagaggtaat
ggtgttggtgttcagctgccaccaggaaacaaaggcgttcctcttgaggttggaaagggc
aggatgctgattgaaggggagagagtggcactcttaggttatggtacggcagtccagagc
tgtttagctgctgcctctttagtagaacgccatggtattcgtctgacagttgcagatgcc
aggttctgcaagccgttggatcatgcccttattcgcagcctagcgaaatcacatgagatt
ttgattacagtggaagaaggatcaattgggggctttgggtctcatgttgttcaatttctg
gcccttgacggtcttcttgatggcaaactaaagtggcgaccagttgttcttcctgatagg
tacattgaccatggatcaccagcagatcagttggtagaagctggtctcacaccatctcac
attgccgcaacagtattcagtattcttggacaaagaagagaggctctggagattatgtca
tcataa
DBGET
integrated database retrieval system
