Populus trichocarpa (black cottonwood): 18102483
Help
Entry
18102483 CDS
T01077
Name
(RefSeq) actin-related protein 9
KO
K11673
actin-related protein 8
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
18102483
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pop03036
]
18102483
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
18102483
INO80 complex (yeast)
18102483
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
18102483
NCBI-ProteinID:
XP_024465878
LinkDB
All DBs
Position
10:10145347..10159033
Genome browser
AA seq
591 aa
AA seq
DB search
MDYLKTVIPSQLVSDRGSNLVVINPGSANIRIGLATQDAPLNIPHCIARYTNQIPKFKVQ
DQMLNSQITTVQHMEREKAYDIIASLLKIPFLDEEVAHNSFPRKIGRADGYNPQSGRGVA
FQWANVYEQDTNSSLALGSSKNEGTSGEYVKKHEGTDAEGISSGERKFRGHIFGEEALRI
SPTEPYCLSRPIRRGHFNISQHYPLQQVLEDIHAIWDWILIEKLHIPHSERNMYSAILVL
PETFDNREIKEMLSIALRDLRFSSAVVHQEGLAAVFGNGLSTACIVNMGAQVTSVVCVED
GVALPSTEKTLPFGGEDISRCLLWTQRHHQTWPQVRTDMLTKPIDLLMLNRLKESYCKIK
EGELDAVTVVHSYEDGMPAGSHKTRLTALNVPPMGLFYPTLLVPDIYPPPPRSWFHDYEN
MLEDTLHLEYPRRPDMSDGLFPGINVGYPMWESYPIFPSKPKKEEKVGLAEAITSSILST
GRIDLQRKLFCSIQLIGGEALTAGFIPAVEERVLHAIPSNEAIDTVEVLQSRTNPTFVSW
KGGAILGVLDFGRDAWIYREDWIRNGIHVQSGRKYKDSYYLQAQATCYINS
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggattacttgaagacggtaatcccttcacagctcgtctccgaccgaggatccaattta
gtagtcatcaatccaggctctgcaaatatccgaataggattagctacacaagatgcaccg
ttaaatattcctcactgcattgctcgttatactaatcaaattcccaaattcaaagtccaa
gatcagatgctgaattcgcagattacaacagtacagcatatggaacgcgagaaggcatat
gatataatagcatcgttattgaaaataccttttctggatgaagaggttgcccacaattct
ttcccacgcaagataggacgtgctgatggatacaatccacagagtggcaggggtgtggct
ttccaatgggctaatgtatatgagcaggacactaattcctctttggctttaggatcatca
aaaaatgaaggtacaagtggcgagtatgtgaagaaacatgaaggcactgatgctgagggg
attagttcaggggaacgcaaattcagaggacacatttttggtgaagaagcgcttagaatc
tccccaacagagccatactgcttaagccgtcctattcgcagaggtcatttcaacatctca
caacattatcctttgcagcaggtgcttgaggacatacatgctatttgggattggatattg
atagagaaactgcatatccctcactcggaaagaaacatgtattctgcgatccttgttttg
ccagaaacatttgataatcgcgaaataaaggaaatgctgtctatagcattacgagacttg
cgctttagctctgcagtagtacaccaggaaggtcttgctgcagtttttgggaatgggtta
tcgacagcatgcattgttaatatgggtgctcaggtgacatctgttgtttgtgttgaggat
ggtgtggctctacctagtacagaaaagactttgccttttggtggagaggatatatcaaga
tgccttctgtggactcagaggcatcatcagacatggccccaggttcggactgacatgttg
acaaagcctatagatttgttgatgcttaaccgtcttaaagagtcctattgtaaaataaag
gagggggagcttgatgctgttactgtagttcattcttatgaggatggcatgcctgctgga
tctcacaaaactcgactaactgctcttaatgtgcctcccatgggtctgttctaccccaca
cttttggttccagatatatatcctccaccacctcgttcttggttccatgactatgagaat
atgctcgaagatacattgcatttagaatatcctagaaggcctgacatgtcagatggttta
tttcctggcattaatgttggatatcctatgtgggagagctatccgatttttccttctaag
cctaagaaagaagagaaggttggccttgctgaagctatcactagtagcattctttccact
ggtcgtatagacctccaaagaaagttgttttgcagtatacaattgattggtggagaggct
ttgacagctggttttattcctgctgtggaggaaagagttttacatgcaattccctcaaat
gaagcaattgatactgttgaggttctacagtcgagaacaaatccaacttttgtgtcttgg
aaaggcggagcaatccttggagttcttgattttggtcgtgatgcttggatttatagggag
gactggattcggaatgggatccacgttcaaagtggcagaaaatacaaggactcgtactat
cttcaagctcaagcaacatgctatataaattcttag
DBGET
integrated database retrieval system