Populus trichocarpa (black cottonwood): 18102495
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Entry
18102495 CDS
T01077
Name
(RefSeq) 3-ketoacyl-CoA synthase 20
KO
K15397
3-ketoacyl-CoA synthase [EC:
2.3.1.199
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00062
Fatty acid elongation
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
pop04626
Plant-pathogen interaction
Module
pop_M00415
Fatty acid elongation in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09103 Lipid metabolism
00062 Fatty acid elongation
18102495
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
18102495
Enzymes [BR:
pop01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.199 very-long-chain 3-oxoacyl-CoA synthase
18102495
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GFIT
Motif
Pfam:
FAE1_CUT1_RppA
ACP_syn_III_C
Chal_sti_synt_C
ACP_syn_III
Chal_sti_synt_N
UPF0242
Motif
Other DBs
NCBI-GeneID:
18102495
NCBI-ProteinID:
XP_006378366
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Position
10:10585631..10588346
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AA seq
524 aa
AA seq
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MAEDQSKQRLGPESVTVHDSEPAETKRNTLPNFLLSVKLKYVKLGYHYLISNAMFLLLIP
LLFIASAHLSTLTIQDFVQLWNHLKFNFVSVTVSSGLLVFLATLYFTSRPRKIYLLDFAC
YKPEPARMCTRETFMEKSVLAGSFSEENLAFQKKIIERSGLGQNTYFPEAVMRITPRPGM
EDARKEAEMVMFGAIDELLAKTGVKAKEIGILIVNCSLFNPTPSLSAMVVNHYRLRGNIL
SYNLGGMGCSAGLISIDLAKQLLQVHPNSYALVISMENITLNCYFGNDRSMLVSNCLFRM
GGAAILLSNRSSDRRRSKYQLIHTVRTHKGADDKCYNCVFQKEDNTRRVGVSLSKDLMAV
AGEALKTNITTLGPLVLPMSEQLLFFATLVGRKIFKMKIKPYIPDFKLAFEHFCIHAGGR
AVLDELEKNLELSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIRKGDRTWQIAFG
SGFKCNSAVWHALRTINPAKEKNPWVDEIDEFPVHVPKVVPIAS
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggatcagagcaaacaaagactgggaccagaatcagtcacggttcatgatagt
gaaccagctgaaacgaagagaaacaccctcccaaactttcttctatcagttaaactcaaa
tatgtgaaacttggttatcattacttaatatccaatgccatgtttctcctgcttattcca
ctcctattcattgcatcagctcatctttcaactcttaccatccaagatttcgtccagctt
tggaaccacctcaaattcaattttgtctcagtaactgttagctcaggccttctagttttc
ttggctactctttacttcaccagccgtcctagaaaaatatacttgttggattttgcatgt
tacaagcccgaacccgctcgaatgtgcaccagagagactttcatggagaaatcagtacta
gcaggcagcttcagtgaagagaacttagcctttcaaaagaagattattgagaggtctggt
ttaggacaaaatacttacttccctgaggcagtgatgcggatcacaccaaggccgggcatg
gaggacgcaaggaaggaggctgagatggtgatgtttggagccattgatgagctcttggcc
aaaactggggttaaagctaaggagataggcattcttatagtgaattgcagtttgttcaat
ccaaccccgtctctctctgccatggtagtcaatcactacagactcagggggaacatattg
agctataatcttggtggtatgggttgcagtgcggggctcatctctattgatcttgccaag
cagctactgcaggtgcatcccaattcctatgctctagtgatcagtatggagaacatcact
cttaattgttactttggtaatgaccggtccatgcttgtctccaactgcttattccgtatg
ggtggtgctgctatccttctctccaaccgatcatccgatcgccgccgctcaaagtatcaa
ctaatccacactgttcgaacacacaagggggctgatgataagtgttacaattgtgtgttc
caaaaagaggataacaccagaagagttggtgtttcgctttctaaggacctcatggctgtt
gctggagaagcccttaaaaccaatatcacaacactagggccgttagtccttcccatgtca
gagcaactcctattttttgctactttagtaggaagaaagatcttcaaaatgaagataaaa
ccgtacattcctgatttcaagttggcttttgagcacttctgcatccatgctggtgggaga
gctgtgttagatgaactagagaaaaatctggagctctctgactggcacatggagccttca
agaatgactctttataggttcggtaacacttctagtagctctttgtggtatgaattggct
tactccgaggccaaagggagaattaggaagggtgatagaacttggcagattgctttcggt
tcaggattcaagtgtaacagtgcggtgtggcatgcattgaggacaatcaatccggcaaaa
gagaagaatccttgggttgatgaaattgatgaattccctgttcatgtgcctaaagtggtg
cccatcgcctcttga
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