Populus trichocarpa (black cottonwood): 18102565
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Entry
18102565 CDS
T01077
Name
(RefSeq) LOW QUALITY PROTEIN: glutamine--tRNA ligase, cytoplasmic-like
KO
K01886
glutaminyl-tRNA synthetase [EC:
6.1.1.18
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00970
Aminoacyl-tRNA biosynthesis
pop01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
18102565
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pop01007
]
18102565
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pop03016
]
18102565
Enzymes [BR:
pop01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.18 glutamine---tRNA ligase
18102565
Amino acid related enzymes [BR:
pop01007
]
Aminoacyl-tRNA synthetase
Class I (A)
18102565
Transfer RNA biogenesis [BR:
pop03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
18102565
Prokaryotic type
Other AARSs
18102565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1c
tRNA_synt_1c_R1
tRNA-synt_1c_C
tRNA-synt_1c_C2
tRNA_synt_1c_R2
GatB_Yqey
Motif
Other DBs
NCBI-GeneID:
18102565
NCBI-ProteinID:
XP_052311976
LinkDB
All DBs
Position
10:14077894..14087461
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AA seq
786 aa
AA seq
DB search
MAVKEEERLELFLKTGLDERTARHTIANNKVTNNLTAVIHEAGVTEGCNRTIGNLLYTVA
TKYPANALIHRPALLGYIVTTKIKTPAQLEAAFSFLSSTASESFELKGFEEACGVGVEVS
EEDIERSVNEVFEQNKGSILELRYRTNVGDLFGHVRKRLPWADPKIVKKLIDAKLYELLG
GRTAADNEKPSKQKKEKPAKVEDKKVADDNPVQPPEELNPFLIFPNPEENFKVHTEIFFS
DRPVLQCCNTKEVLDKHLKRTSRKVYTRFPPEPNGYLHIGHAKAMFVSFGLAKEQGGCCY
LRYDDTNPEAEKKEYIDHIEEIVEWMGWKPFKITYTSDYFQELYELAVELIQRGHAYVDH
QTPEEIKEYREKKMNSPWRDRPIAESLKLFEEMRQGMLEEGKATLRMKQDMQSDNGNMHD
LIAYRIKFTPHSGDKWCIYPSYDYAYCIVDSLEDITHSLCTLEFETRRASYYWLLHVLDL
YQPYVWEYSRLNVTNNVMSKRKLNFLVTKKLVDGWDDPRLMTLAGLRRRGVTSTAINAFV
RGIGITRSDCCTIRLERLEYHIREELNRTVPRTMVVLQPLKVVITNLDSGLVMDLDAKKW
PDASTEDSSAFYKVPFSRVVYIEQSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVVLA
DDNETIVEIWAEYDHSKKXKPKGVIHWVAEPSREADPLSIEVRLFAKLFNSENPAELEDW
LADVNPKSKVVISGAYAVPSLRYAAIGDRFQFERLGYFVVDKDSLLLRGVFNRTVTLRDS
YGKSRK
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgaaggaagaagagagattggagctgttcttgaagaccggtctggatgaaagg
actgctcgtcataccattgctaacaacaaggttaccaacaatctcactgctgttattcac
gaggctggtgtcacagagggatgtaatcgaacaattggaaatcttctttacacggttgct
actaagtacccagcaaatgccctcattcatcgccctgctttgctcggatatattgtcacc
acaaagattaaaaccccagcccagctagaagctgcattttcatttttatccagtactgct
tcagagagttttgagttgaagggatttgaagaagcttgtggtgttggggttgaagtctct
gaagaagatattgagcggagtgttaatgaagtatttgaacaaaacaagggatcgatattg
gagctccgttatcgaacaaatgtgggagatctatttgggcatgtccgcaagaggcttcca
tgggctgatccaaagattgtcaagaaactcattgatgcaaaattatatgaattgcttggt
ggaaggactgcagcagataacgagaagccttcaaaacagaaaaaagaaaagcctgctaaa
gtcgaagataaaaaagttgctgatgacaatccagtacagccacctgaagaacttaatcca
ttcttgatatttcccaatcccgaggaaaatttcaaggtgcatactgaaatattcttcagt
gatcgacctgttctgcaatgctgcaacacaaaggaggtgcttgataagcacctcaaaaga
accagcaggaaagtttatacccgcttcccccctgagccaaatggatatctacacattggt
catgccaaggcaatgtttgttagctttggcctcgcaaaggaacaaggtggatgctgctac
cttaggtatgatgatacaaaccctgaagctgaaaagaaagaatacattgatcatattgag
gagattgtcgagtggatgggttggaaaccatttaagatcacttacactagtgattatttt
caagagctttatgaattagcagttgagctgatacaaaggggtcatgcttatgttgatcac
cagacaccggaagagatcaaggagtatagagaaaagaagatgaacagtccttggagggat
agacctattgcagaatctttgaaactttttgaagaaatgagacagggcatgcttgaagaa
ggcaaagcgacactcagaatgaagcaagacatgcagagtgataatgggaatatgcatgac
ctcattgcttatcgaatcaagttcactccacattcaggagacaagtggtgtatctatcct
agttatgactatgcttactgcattgtggattctctggaggacatcacacattcgctctgc
accctggaatttgagacccggcgtgcttcatactactggctgttacatgtattggatctt
tatcagccttatgtgtgggaatactcacgactgaatgttaccaacaatgtgatgtcaaag
cggaagttaaatttcttggttacaaagaagcttgttgatggttgggatgaccctcgattg
atgactctagctggtttaaggcgtagaggtgtaacttcaactgcaatcaatgcttttgtc
cgaggaattggtattactagaagtgattgttgtacgatacgtttggaacggcttgagtat
cacataagagaagaattaaacagaacagtaccccgtacaatggttgtgctgcagcctcta
aaggtagtcattaccaacctggactctgggttggttatggatcttgatgctaaaaaatgg
cccgatgcctcaacagaagattcttctgctttctacaaggttccattttccagagttgta
tacattgaacaatctgattttcggatgaaagactcgaaggactactatggtctcgctcct
ggtaaatctgtcctgctcaggtatgcattcccgataaagtgcacagaagtagtccttgct
gatgataatgagactattgttgagatctgggccgagtatgatcattccaagaagnaaaaa
ccaaagggagttatacactgggttgctgaaccttcacgggaagctgatccactaagcata
gaagttagattgtttgctaaactatttaattctgagaatcctgcagaacttgaagattgg
cttgcagatgtgaacccgaagtccaaagtggtgatatctggggcatatgctgtaccatca
ctgagatatgctgccattggagacagattccagttcgaacgccttggctactttgtggtt
gataaggactctctacttctgagaggcgtcttcaatcgaactgtaacacttagagacagc
tatggtaagagcaggaagtag
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