Populus trichocarpa (black cottonwood): 18102616
Help
Entry
18102616 CDS
T01077
Name
(RefSeq) flowering time control protein FCA isoform X1
Organism
pop
Populus trichocarpa (black cottonwood)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
WW
WW_TCERG1
Motif
Other DBs
NCBI-GeneID:
18102616
NCBI-ProteinID:
XP_024465308
LinkDB
All DBs
Position
10:complement(15865243..15876417)
Genome browser
AA seq
769 aa
AA seq
DB search
MNRHRGGDRYSDSDNDNDNYNYNTSSYNNTIDNQDSSYPNRRPSRFSDAPSRFSDSPINR
YSDNGNSNNYTNYNLRSPNNYHGGGGGRRAFDSPPGGGVGGDGGFRPMGGGGDGGFRPMG
GAGGGFVPNYQVPPPLSLPPQNISGRKRGFHGSSPDRFDGGGGRSGFAFAKLFVGSVPRT
ATEMDIRPLFEEHGNVIEVALIKDKRTGQQQGCCFIKYATSEEADRAIRALHNQRTLPGG
VGPIQVRYADGERERLGAVEYKLFVGSLNKQATEKEVEEIFTPYGRVEDVYLMRDEMKQS
RGCGFVKYSHRDMALAAINGLNGIYTMRGCEQPLTVRFADPKRPRPGGDSRGGPAFGSPG
AGPRFQASGLRPPPNLGDPMGDHIPPNAWLPMSPQNMGPSSNAGVHGFGNQLPPRSGDLA
MPLNQTVNQSLQHLPPASQQISPLQKPLQSPQHLPPSLQLHAQAASSYPQTQTSHVSQLQ
SSLATGQTPFSQALPSQHMIGFGRQLPASQTEIQQGISSTVALQAPHSMSVAINQQQLPA
PVQQQLLQPLQQSPSQLAQMLSQQTQTLQASFQSSQQAFSQLQQQLQMMQPSNQSTLQQS
PQAPRQQWPPQAVASTPLPVDLPPSTSAPTAGVMSQTVAPVKCNWTEHTSPEGFKYYYNG
VTHESRWEKPEELKLFEQQQQLHQKPPVQLPQPQTNPQVLPTQQVPQTQQVHLQTQFRHQ
QQQPQPSFSSTEHGYTQLPAAASSVNDSTRFQGRPVAQDWMWRNKPAGT
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgaacagacacaggggaggagaccgctacagcgacagcgacaacgacaacgacaactac
aactacaacacaagcagctataacaacaccatcgacaaccaagattcctcgtaccctaac
cgccgcccctcccgcttctccgatgccccttcccgcttctccgacagtcctataaaccgc
tactctgacaacggcaacagcaacaactataccaattacaatctccgtagccctaataat
taccatggcggtggagggggaaggcgcgcatttgatagtcctccgggtggtggtgtaggt
ggagatggtggattccggcccatgggtggtggtggtgatggggggtttaggccgatgggc
ggtgcaggtggggggtttgtgcctaattatcaagtgccgcctccgttgtccctgccacct
cagaatatttccgggcgcaaacgagggtttcacggaagctcgcctgataggtttgatggt
ggtggtggtcgtagtggttttgcttttgcaaagctctttgtgggttctgttccaaggaca
gctactgaaatggatattcgccccttgtttgaagaacatggaaatgtgatagaggttgca
ttgatcaaagacaagagaacaggacagcaacaaggctgttgttttataaaatatgcaacc
tcagaagaagctgatagggccatcagagctttgcacaatcaacgaactctgcctgggggt
gtgggtcccatccaagttagatatgctgatggagaacgagagcgccttggtgcagttgag
tacaagttgtttgttggttcactgaacaaacaggctacagaaaaggaagttgaggaaatt
tttacaccatatggtcgggttgaagatgtttaccttatgcgtgatgaaatgaagcagagt
cgtggttgtggttttgttaaatactcccatagagacatggcattggcagctattaatggt
cttaacggaatatatacaatgagaggttgtgagcaaccattaactgtccggtttgcagat
cctaagaggcccaggcctggaggagactcaagaggtggtcctgcatttggtagtccaggt
gccggcccaagatttcaagcttcagggcttagaccgccaccaaatttaggggatcctatg
ggtgaccatattccgcctaatgcttggcttccaatgagtccccagaatatgggtccttcc
tccaatgctggtgttcatggttttgggaatcagttgcctcctaggtctggtgacttagca
atgcctttaaaccagactgttaaccagtcactgcagcatctcccccctgctagccagcaa
atatcacctctgcagaaaccacttcaatcgcctcagcacttgccaccttcccttcaacta
catgctcaagctgcatcttcctatcctcagacacagacttctcatgtcagtcagctacag
agttcgcttgcaactggtcaaacacccttcagtcaagcactgccatcacagcatatgatt
ggctttggaagacagttacctgcttctcaaactgagatccagcagggcatctcatcaact
gtagcactacaagccccccactccatgtctgtagcaataaatcaacagcaattgcctgca
cctgttcagcagcaactacttcagcctctccagcagtccccttctcagttagctcagatg
ctgtcacaacaaactcaaaccctgcaagcaagctttcagtcatctcagcaggctttttcc
cagctgcagcaacagttgcagatgatgcaaccatcaaaccagagcacactgcaacagagt
ccccaggctccaagacagcagtggcctccacaagcagttgccagcactccacttcctgta
gatttgcctccatctacttctgctcctactgcaggtgttatgagtcagactgtagctcct
gtaaaatgtaattggactgagcatacatcccctgagggattcaagtactattataacggt
gtaactcatgaaagccgatgggagaagcctgaagaattgaaattatttgagcagcagcag
caactgcaccaaaaacctccagttcaactgcctcaaccacagacaaatcctcaagttttg
cccacccagcaagtgccacaaacccaacaggtgcatcttcaaacacagtttcgccaccag
caacagcagccacagccttccttttcttctacggaacatggttatacacaattacctgca
gcagctagttcagtcaacgattcgacacgcttccaggggcgtccagttgctcaggattgg
atgtggaggaataagccagcaggaacttga
DBGET
integrated database retrieval system
