Populus trichocarpa (black cottonwood): 18102796 Help Entry 18102796          CDS       T01077                                  Name (RefSeq) polygalacturonase isoform X1   KO K01184   polygalacturonase [EC:3.2.1.15] Organism pop  Populus trichocarpa (black cottonwood) Pathway pop00040   Pentose and glucuronate interconversions pop01100   Metabolic pathways Module pop_M00081   Pectin degradation Brite KEGG Orthology (KO) [BR:pop00001]  09100 Metabolism   09101 Carbohydrate metabolism    00040 Pentose and glucuronate interconversions     18102796 Enzymes [BR:pop01000]  3. Hydrolases   3.2  Glycosylases    3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds     3.2.1.15  endo-polygalacturonase      18102796 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Glyco_hydro_28 Pect-lyase_RHGA_epim Beta_helix NosD Nab2-zf4 Motif Other DBs NCBI-GeneID:  18102796 NCBI-ProteinID:  XP_024465025 LinkDB All DBs Position 10:complement(22231898..22233939) Genome browser AA seq 326 aa AA seqDB search MAHYTLSSCVLLALLVMVFTSYLAIAEQHNVLSYGAKPDGGTDSTTAFLAAWAQACSSIS PSTIYVPPGRFFLQNVEFKGPCKNKAIVVRIDGTLLAPTDYRIIGNAGNWILFQNVDGVT VSGGVLDGHGSGLWDCKRSGKNCPSGATTLRFSNSNNIVISGLTSLNSQMFHIVINGCNS VKIQGVRITASGNSPNTDGIHVQLSSNITILSSKIGTGDDCVSIGAGTTNLWIENVVCGP GHGISIGSLGKDLNEPGVQNVTAKTITFIGTQNGLRIKSWGRPSDGFVRNVLFQHAAMTN VQNPIVIDQNYCPDNINCPGQAGFWG NT seq 981 nt NT seq  +upstreamnt  +downstreamnt atggcacattatacgttaagctcttgtgttcttcttgcccttcttgtcatggtctttacc tcatatttagcaattgcagaacaacacaatgtcctaagttatggggcgaagccagatggt ggaactgactcgaccacagcctttcttgctgcttgggcacaagcatgtagctccattagc ccatctaccatttatgtcccgccaggcaggttctttctacaaaatgtagagtttaagggt ccatgcaagaacaaagccatcgttgtacgtatagatggcacacttctagctccgaccgat tatcggattattggtaatgctggaaactggattctctttcagaatgttgatggtgttacg gtttctggtggggttctagatggacatggctctggtttgtgggattgcaagcgatctggc aagaactgcccaagtggtgccacgacgctacgcttttccaattcaaacaacatagtgatc agtggattaacttcattgaatagccaaatgttccacattgttatcaatggttgcaacagc gtgaagattcaaggggttaggattacggcttccgggaacagtccaaacacagacggcatt catgttcaattatcgagcaacatcacaatcttgagctccaagattggaaccggcgacgac tgtgtctcaatcggtgccggcacgactaacttgtggattgaaaatgttgtgtgtggccct ggacacggaatcagcattggaagtttaggcaaggaccttaatgagcctggagtgcaaaat gtgactgctaaaacgattacatttattggcactcaaaatgggttgaggatcaagtcttgg gggaggcctagcgatggttttgttaggaatgtacttttccagcacgctgccatgaccaat gttcagaatcccattgttattgaccagaactactgccctgacaacataaattgccctggc caggcaggcttctggggttaa

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