Populus trichocarpa (black cottonwood): 18103014
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Entry
18103014 CDS
T01077
Name
(RefSeq) heat stress transcription factor A-2b
KO
K09419
heat shock transcription factor, other eukaryote
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
18103014
Transcription factors [BR:
pop03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
18103014
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSF_DNA-bind
Motif
Other DBs
NCBI-GeneID:
18103014
NCBI-ProteinID:
XP_006377347
UniProt:
U5FYD0
LinkDB
All DBs
Position
11:complement(4108677..4110665)
Genome browser
AA seq
211 aa
AA seq
DB search
MAATFSQLDQDTTSKSSSSNTRSPRTRSPAPFLSKTYDLLEEGGAHDSVDDHPHGKRVVS
WNAEGNGFVVWSPAEFSELTLPRYFKHSNFSSFIRQLNTYGFKKTSSKQWEFKHEKFQKG
RRHMLVEIIRKKCEPSMFPAYLKASSNQENAIIDMEETNCLTLMAENKNLRREKLELQIQ
IAQFKALETKLLDCLNQYNMGNHQNKTRRLC
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atggcggccactttctctcagcttgaccaagacacaacaagcaagagttcttcaagcaac
accaggtctccaagaacaagaagccctgctccatttttatccaagacttacgacttgcta
gaagaaggtggggctcatgatagcgttgatgatcatcctcatggcaagagagttgtttct
tggaatgcagagggaaatgggtttgtagtgtggtctccagctgagttctcagagctcact
ttgcctagatacttcaagcacagcaacttctctagcttcatccgtcagcttaacacttat
ggattcaagaaaacatcatcgaagcaatgggaattcaagcatgaaaagtttcagaaaggg
aggaggcacatgctagtcgagatcattcgaaaaaaatgtgagcctagtatgtttccagca
tatttaaaggcttcttctaatcaagagaatgcaataattgacatggaagaaactaattgt
ttgacgctcatggcggagaacaagaaccttcgaagagagaaacttgaactgcaaatccaa
atagcacaattcaaggctctagaaactaagttattggactgtcttaatcaatacaatatg
ggaaaccaccagaacaaaaccaggaggctatgttaa
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