Populus trichocarpa (black cottonwood): 18103026
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Entry
18103026 CDS
T01077
Name
(RefSeq) vesicle-fusing ATPase
KO
K06027
vesicle-fusing ATPase [EC:
3.6.4.6
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
18103026
Enzymes [BR:
pop01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.6 vesicle-fusing ATPase
18103026
Membrane trafficking [BR:
pop04131
]
SNARE
SNARE associated proteins
Others
18103026
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
CDC48_2
AAA_5
CDC48_N
AAA_2
AAA_22
TIP49
RuvB_N
AAA_24
nSTAND3
Mg_chelatase
AAA_14
AAA_33
AAA_7
RNA_helicase
NACHT
AAA_18
ABC_tran
TsaE
NSF_ATPase_lid
AAA_19
ATPase
SLFN-g3_helicase
bpMoxR
AAA_11
Parvo_NS1
AAA_3
Motif
Other DBs
NCBI-GeneID:
18103026
NCBI-ProteinID:
XP_052301472
LinkDB
All DBs
Position
11:4226102..4235875
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AA seq
740 aa
AA seq
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MASRFGFQSSTMIVTNTPGADLALTNLAYCSPSDLHNFAVPGTKLFLALVADSFVLSLSP
HENIRTGQIALNSIQRRHARVSSGDTVSVRRFIPPEDFNLALLTLELEFVKKGTKNEQID
AVILANQLRKRFAKQVMTSGQKVTFEYHGNNYIFTVTQAAVEGREDSKDAERGMISSDTY
IVFEASNSSGIKIVNQREAASSNIFRQKEFNLQSLGIGGLGAEFADIFRRAFASRVFPPH
VTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGREPKIVNGPEVLSKFVGETEKNVR
DLFADAENDQRTNGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVES
LNNVLLIGMTNRKDLLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLSPD
VNLQELAARTKNYSGAELEGVVKSAVSFALNRQLSLDDLTKPVDEESIKVTMDDFLHALH
DIVPAFGASTDDLERCRLNGMVDCGDRHKHIYQRAMLLVEQVKVSKGSPMVTCLLEGPSG
SGKTALAATVGIDSDFPYVKIISAETMIGLQESTKCARIVKVFEDAYKSPLSIIILDDIE
RLLEYVAIGPRFSNIISQTLLVLLKRLPPKGKRLLVLGTTSEVSFLDSVGICDAFSVTYL
LPTLKAEDAKKVLKQLNVFAEDDISAAAEALDDMTIKKLYMLIEMAAQGEQGGDAEAIYS
GKEKIKIAHFYDCFQDMVRF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtcggttcggtttccaatcgtcgacaatgatcgtgacgaacacaccgggggca
gatctcgcactcacaaacctcgcttactgctcaccctccgatctccacaacttcgccgtc
cctggaaccaagctcttcttagctttagtcgctgactccttcgttctatctctttctcct
catgaaaatattcgtactggccaaattgcgctgaattcgattcagagaaggcatgcgagg
gtttcatctggtgatacggtatctgtgcgcaggtttatccctcctgaagattttaacctt
gcattattaacacttgagttggaatttgtgaagaaagggacaaaaaatgaacagattgat
gctgttattctggccaaccaacttaggaaaaggtttgctaaacaggttatgacatcgggg
caaaaagtaacatttgagtatcacggaaacaattacatatttacagtcactcaagctgct
gtggaggggcgagaagattctaaagatgctgagagaggaatgatttcaagtgacacgtac
attgtctttgaagcatcaaattctagtggcataaagattgtcaatcagcgtgaagctgcc
agtagcaacatctttaggcaaaaggagtttaatcttcagtcactaggtataggtggtttg
ggcgcagaatttgcagatatatttcgaagagcttttgcctctcgtgttttcccacctcac
gtgacaagcaaattggggatcaagcatgtaaagggtatgctgctttatgggcctcctggc
actggaaaaactcttatggctcgtcaaattggaaaaatgttgaatgggagggagccaaag
attgttaatggccctgaagtcctaagcaaatttgtcggcgagactgaaaagaatgttaga
gacctgtttgctgatgctgaaaatgatcaaaggaccaatggggaccaaagtgatttgcat
gtaataatctttgatgaaattgatgccatatgcaagtcaagaggatcaactcgagatggt
actggagtccatgatagcatcgtgaaccagcttcttacaaagatagatggtgtggagtcc
ctgaataatgttttacttattggaatgaccaatcgaaaggatttgcttgatgaagcgctt
ttgaggccaggacgattggaggttcaagttgagataagccttcctgatgaaaatggtcgg
ctgcagattcttcaaattcatacaaacaagatgaaagagaattcttttctatctcccgat
gtaaatcttcaagagcttgctgctcgtacaaaaaattacagtggagcagaacttgaaggt
gtagtgaaaagtgcagtatcatttgctttgaatcgacaactaagtctagatgatcttacc
aagccagtagatgaagagagtattaaagtaactatggatgactttctgcatgcactccat
gacattgttccagcatttggagcctccactgatgaccttgaacgatgcagacttaatggc
atggtggactgtggtgatcgacacaagcatatttatcagagagctatgctactggtggag
caagttaaagttagcaagggaagtccaatggttacttgccttctggaaggcccaagtggc
agtggtaaaactgcattggcagctactgttggcatcgacagtgattttccatatgtcaaa
ataatctcagctgaaacaatgattggtctacaagagagcactaaatgcgctcggattgtt
aaggtgtttgaggatgcgtacaagtctcctttgagcattataattcttgatgacattgag
agattattggagtatgttgctattgggcctcgcttttcaaatataatttctcagacattg
ttggtactcctcaaacgtcttcctcccaagggaaagagacttctggtgttagggacaaca
agtgaagtaagcttcttggattcagttggtatttgtgatgctttctctgttacttacctc
ctccccacgttgaaggcagaggatgcaaagaaggtattgaaacaactcaatgtttttgct
gaagatgacatcagtgctgctgcagaagccctggatgatatgactatcaagaagctctat
atgctgattgagatggctgcccaaggagagcaaggtggggatgcagaggctatctattcc
ggcaaagagaagattaagattgcacatttttacgattgctttcaggacatggtgcgattt
tag
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