Populus trichocarpa (black cottonwood): 18103055
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Entry
18103055 CDS
T01077
Name
(RefSeq) protein FRIGIDA-ESSENTIAL 1 isoform X1
KO
K27809
protein FRIGIDA-ESSENTIAL 1
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
18103055
Transcription factors [BR:
pop03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
18103055
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Gene cluster
GFIT
Motif
Pfam:
Torus
zf-CCCH
zf_CCCH_4
zf-CCCH_4
Beta-prop_VPS8
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
18103055
NCBI-ProteinID:
XP_006377394
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Position
11:complement(4568237..4579527)
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AA seq
760 aa
AA seq
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MPPSAAATGDDDEDHALPSPNPSFAQISGSDMDIDNGDDEEEEDPEEEVGGGDDDDDDEK
IEEIEEKEEVEEEEVDQRRNDNRQHLESDRQMGSHSTHEMSELREDSVSNFKCSGPLDGP
LTLQKEKSCVNYLDSWSPKLSKHLVIAQKNGTLEHAINKTDAFRNSKTHLSNSSEAIAVE
TTEPFVITGIEVDVVLSKRNCLGQEANVVLDSKEELKPVDVKSEDSKEQTESRFSRLVAS
GTRARSLSPSTELRDGNKRAAVICDFFAKGWCIRGSSCRFLHTTNKADNTGQQLGVDEVA
TREDQFDEGVRNILETPKFPHFPDPVAASTGKEATFSSHFSSERLPPLEHKENERLHQLD
DKHKLSLRQRVGIPLNAKQFSSSKDDPGFSSSFKDVGIENFRQQWPATDYGSYTSLINRG
SSFSFSSSFDTSLLGSQKLLDSDRASRSSSLLQSASAFSGSEPESLSLASVPGDQLRHAE
HKTKISSNDWEPSVPFRPSFFITPEMISSAGSKYDPLRDSFVLPNVGDKSFKFSFFSLGA
SISNTSQQPIYGDSLSNRNFGTEFNGDKSTISSHDKPHGSLSDKNCSTPGKDSFTTATVT
GGAGTADGENGSALKEESASGIGYDKVNRVTNKIDRDARPQTDGSRHKKDLKADSVRQNN
DMEVDQKIGGDTQKESKVLRHFRSALIDFVKDLLKPTWREGHLSKDAHNTIVKKTVEKVL
STLQPHQIPATVESIKQYLSSSQPKMAKLVEGYISKYGKS
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgccaccatcagccgccgccaccggcgacgacgacgaagaccacgcccttccctctccc
aatccatcgttcgctcaaatctcgggttccgacatggatatcgataacggtgatgacgaa
gaagaggaggatccggaagaagaagtaggcggcggcgacgacgacgacgacgacgaaaag
atagaagaaatagaagaaaaagaagaagttgaagaggaggaagttgatcagagacgtaac
gataatagacagcatctggagtctgacaggcaaatgggatcacattctacacatgagatg
tctgaactgagggaagatagtgtcagtaatttcaaatgttctggccctttggatggacca
ttgacattgcagaaggagaagtcatgtgtgaattatttagattcatggtcccccaaattg
agtaaacatttggttattgctcaaaaaaatggaactttggaacatgcaattaataaaaca
gatgccttccgcaatagcaagactcatttaagtaatagtagcgaagctatagctgttgag
accactgagccatttgttatcacaggcatagaggtggatgttgtcttatctaagagaaac
tgcttgggtcaggaggctaatgtcgttctggattctaaggaagaacttaaaccagtggac
gtgaagtcagaggatagcaaagagcaaacagaatcgaggttttccagattggtggcttct
gggacaagggcaagaagtttatccccttctactgagcttagggatggaaacaaacgcgca
gcagtaatttgtgacttttttgccaaagggtggtgcattagagggagttcatgtaggttc
cttcatacaaccaacaaagcagataacacaggccaacagttaggggtagatgaggtcgca
acccgagaagaccagtttgatgaaggtgtgagaaacattttggagacaccaaagtttcct
cattttcctgacccagttgctgcttcaacaggaaaagaagctacattttcttctcatttc
tcttcagaaagactcccaccactagaacacaaagaaaacgaaaggttgcatcagttggat
gataagcacaagttgtcacttcgacaaagagtgggcattcctctcaatgccaagcaattt
tcttcctccaaagacgatcctggcttttcttcctcatttaaggatgtaggaatagagaat
tttagacaacaatggcctgcgactgattatggtagttacacttctctaattaacagagga
tcatcattttcttttagttcctcttttgatacaagcctgcttggttctcaaaagctgctg
gatagtgatcgtgcttctagatcatcttcattactgcaaagtgcttctgctttctctggt
tctgagccagaaagtttgtctctagctagtgtacctggggatcaattgcgtcatgcagag
cataaaacaaaaatttcttcaaatgactgggagccatctgtaccttttcgcccttccttt
ttcattactcctgaaatgatatcatctgctgggagcaagtatgatcctcttcgagatagc
tttgtcttgcccaatgtaggagacaaatccttcaaattctctttctttagtctaggagca
tccatctcaaatacatcgcagcaaccaatatatggtgattccttatcaaatcgaaacttt
ggcactgaatttaatggtgacaaaagtaccatatcttctcatgataaaccccacggaagt
ctgtcggataaaaattgcagtacacctggaaaagattcatttaccactgcaacagtgaca
ggaggagctggtacagctgatggtgaaaatgggagtgcactcaaggaagaaagtgcctca
ggtattggttatgacaaagttaatcgagttacgaacaaaattgatcgtgatgctagaccc
caaacagatgggtcaagacacaaaaaggacttaaaggcagatagtgttagacaaaacaat
gacatggaggttgatcaaaagataggtggggatacgcaaaaagaatcgaaagtgctgaga
cattttcgttctgctcttattgattttgttaaagatttgttgaaaccaacttggcgtgag
ggtcatctcagcaaggatgcacataacacaatagttaaaaagacagttgagaaggttctt
agcaccttgcaacctcatcaaattccagctactgttgagtcaattaagcaatatctttct
tcatctcagccaaaaatggcaaagcttgttgagggatacatttctaagtatggaaaatct
tga
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