Populus trichocarpa (black cottonwood): 18103075
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Entry
18103075 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC18103075
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
pop
Populus trichocarpa (black cottonwood)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
Tropomyosin
Shugoshin_N
Motif
Other DBs
NCBI-GeneID:
18103075
NCBI-ProteinID:
XP_024436836
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All DBs
Position
11:complement(4828065..4836919)
Genome browser
AA seq
1066 aa
AA seq
DB search
MFGFFRGSADSSPQSSYSQSSSSSMSPSPSAPPVTGPARPIRLVYCDEKGKFRMDPEAVA
TLQLVKEPIGVVSVCGRARQGKSFILNQLIGRSSGFQVASTHRPCTKGLWLWSAPLKRTA
LDGTQYNLLLLDSEGIDAYDQTGTYSTQIFSLAVLLSSMFIYNQMGGIDEAALDRLSLVT
QMTKHIRVRASGGRSSASELGQFSPIFVWLLRDFYLDLVEDNRRITPRDYLELALRSVQG
NGKDIAAKNEIRDSIRALFPDRECFPLVRPLNNENDLQHMDQISLDKLRPEFRAGLDALT
KFVFERTRPKQIGATVMTGPVLVGITESYLEALNNGAVPTISSSWQSVEEAECRRAYDAA
TEIYMSSFDRSKPTEEVVLRESHEEAVKKSLAAFNAAAVGIGSARKKYEELLQKFSRRAF
EDYKRNAFMEADLRCSNTIQNMEKRLRTVCHASDANVDNVVKVLDGLLSEYETSCHGPGK
WQKLAMFLQQSLEGPILDLAKRLNDKIGSEKSSLVLRCRSIEDKMALLHKQLEASEKDKS
EYMKRYDEAINEKKKLADDYMRRINDLQSNRSSLDERCSNLVKTLDTAKQETSNWKRKHD
QVLSKQKADEEQAASEIAILKSRSSAAEARLAASHEQTRSAEEEAAEWKRKYDIAVRETK
AALEKASNVQGRINKETQLREDALREEFSGRLVVKEDEIKEKNRKIEHAEQCLTTLNMEL
KAAESKMKSYDTEISSLKLEIKELAERLETANAKAQTYEREARILEQEKIHLEQRYRSEF
ERFAEVQERCNHAEKECKRATELADKARTDAVSAQKEKNEFQKLAMERLAQIERAQRHTE
SLDRQKNDLAGELESVRVSEMDAVLKVALLEARVEEREKEIESLLKSNNVERASTVKALQ
DLLDDERKAHSVANKRAEDFSLQLEVARAKLDSLQQEFTSVRLNESALDGKLKAASHGKR
IRTEDVEMGVGSVQDTGTDDRRVKKRSRSTTSPVMLTQPEDGGSVFKGNEDNQSQRSDQE
DYRKFTIQELKQELTKHNYGAEILKLRSHNKKDILALYEKYVLQKS
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgttcggcttctttagaggaagcgccgactcctctccccagtcatcctactctcagtcg
tcttcttcctctatgtcgccgtctccgtcggctcctcctgtcaccggaccagctaggccg
atccgacttgtttactgcgatgagaaagggaagtttcggatggatccagaagcagtggct
actctccagcttgttaaggaaccaatcggtgtcgtttcagtctgtggtcgcgctcgacag
ggaaaaagctttattttgaatcagcttattggcaggagtagtggatttcaagtagcatcc
actcatcggccatgtacaaaaggactttggttgtggagtgcaccgttaaagagaactgcc
cttgatggaactcagtacaatctcttactgttagacagtgaaggaatagatgcttatgat
caaacaggaacatacagcactcagatattctccttagctgtccttctatctagtatgttc
atttacaatcagatgggtggtatagatgaagcagcacttgatcgactctcccttgtcact
caaatgacaaaacatattcgtgttagagcttctggtggaagaagttcagcttctgaactc
gggcagttctccccaatttttgtttggcttctaagggatttttatctggatttagttgag
gataataggagaataacaccccgtgactatctagagcttgctctaaggtcagttcaggga
aatggaaaagatatagctgctaaaaatgagattcgggactcaattcgagctctgtttcca
gacagagaatgcttccctcttgtgcggcctttgaacaatgaaaatgatctccagcatatg
gatcaaatttcgttggataaactaaggcctgaatttagagctgggctggatgcattgaca
aaatttgttttcgagagaacaaggcccaagcaaattggcgccactgtaatgacaggccca
gtccttgttggtattacagaatcttatctagaggctctcaataatggtgcagtaccaaca
atatcttcctcatggcagagtgttgaagaagctgagtgtaggcgagcatatgacgctgcc
acagaaatttatatgtcgagttttgaccgttcgaagccaactgaggaagttgttttgaga
gaatcacatgaagaagctgttaaaaaatcactggctgcatttaatgctgccgctgtgggg
attggttcagcaaggaagaaatatgaagagcttctccaaaaattctccagaagagcattt
gaggattacaagaggaatgcatttatggaggcagacttgagatgttcaaacactatacaa
aacatggaaaagagactgagaacagtctgtcatgcttctgatgccaatgttgataacgtt
gtgaaagtccttgatggtcttttatctgaatatgaaacatcatgtcatggtccagggaaa
tggcagaaattagcgatgttcctacaacaaagtttggaaggtccaatacttgaccttgca
aaacggctaaatgataaaattggatccgagaagagttctcttgtgctgagatgtcgctca
atagaggataaaatggcgttacttcacaagcaactagaagctagtgagaaagataagtct
gaatatatgaagcgatatgatgaagctattaatgaaaagaagaagcttgctgatgattat
atgaggcgcataaatgatttacaaagtaatcgtagttcattggatgagaggtgttctaac
ttggtgaaaacattggatactgccaagcaagaaacatccaactggaaaagaaaacatgat
caggtgttatcaaagcagaaagctgatgaagagcaagcagcttcagagattgcaattctc
aagtctcggagcagcgctgctgaagcaaggttggctgcttctcatgaacaaaccaggtca
gctgaagaagaggcagcagagtggaaacggaagtatgacattgctgtaagagagacaaaa
gccgctttagagaaagcgtcgaatgtgcaaggaagaattaataaagaaacacaactgagg
gaagatgcactgcgggaagaattttctggccgtttggttgtgaaggaagatgaaataaag
gagaagaataggaagatagagcatgcagagcagtgtttgacaaccttaaacatggagcta
aaggctgccgagtcaaaaatgaagagttatgatactgaaatatcctccctgaagcttgaa
atcaaagagttggctgagagactggagactgcaaatgctaaggcccaaacttatgagaga
gaagctaggattctggaacaagagaagatccatctggagcaaaggtaccgatctgagttt
gagaggtttgcagaagtccaggaaaggtgtaatcatgctgaaaaagaatgtaagagggct
acagaattagctgataaagctaggactgatgcagtatctgcacaaaaggaaaaaaatgag
tttcagaaattggcaatggaaagattagcccaaattgagagggctcagaggcatactgaa
agcttggatagacagaaaaatgatctggctggtgaacttgaaagtgttcgtgtgtcggag
atggatgctgtcttgaaagttgcattgctagaagctagagttgaagaaagggaaaaagaa
atagagtcacttctgaaatcaaacaatgtggagagggctagtacagttaaagcacttcaa
gatcttctggatgatgaacggaaagcccacagtgttgcaaataaaagagctgaagacttc
tctcttcagttggaagtagcacgggctaaacttgattcccttcaacaggagtttacttca
gttcgtctgaatgagtcagcattggatggcaagcttaaggctgcttcccatggaaaacga
attagaacagaagatgtcgaaatgggtgtaggatctgttcaagacacaggcacagatgac
agaagagtaaagaagaggtcgaggagtacaaccagccccgtaatgctcacacaaccagaa
gatggtggttcagtgttcaagggcaatgaggataatcaaagtcagcgatcggaccaggaa
gattatagaaagttcactatccaggaactaaagcaggaacttacaaaacataattatgga
gctgagatcctcaagttgcgaagtcacaacaagaaagacatccttgcattatatgagaaa
tatgttctccagaagtcatga
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