Populus trichocarpa (black cottonwood): 18103082
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Entry
18103082 CDS
T01077
Name
(RefSeq) auxin response factor 3 isoform X1
KO
K14486
auxin response factor
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
18103082
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Motif
Pfam:
ARF_AD
B3
BRWD_AD
Motif
Other DBs
NCBI-GeneID:
18103082
NCBI-ProteinID:
XP_006377428
UniProt:
U5FVV3
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Position
11:complement(4914363..4940293)
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AA seq
740 aa
AA seq
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MVGMIDLNTIEEDETTPSCGSLSSPSSSSAASALSASGSGSSTSSVCLELWHACAGPLIS
LPKRGSVVVYFPQGHLEQLPDLPLAVYDLPSHVFCRVVDVKLHAEAASDEVYAQVSLVPE
SEEIEQKLREGIFEGDGEEEDGEATVKMTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCF
PPLDYTQQRPSQELVAKDLHGSEWKFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLF
LRGEDGELRLGVRRAAQVKCGPTFPAQWNHQLNQISPGDVANAISTRSFFHIYYNPRASS
SEFIIPFNKFLKSLDQSFSSGMRFKMRFETEDAAERRYTGIITGVSELDPARWPGSKWKC
LLVRWDDMEANRLSRVSPWEVEPSGSGSFSSSNNFTAPGLKRSRSGLPSSKAEFPIPDGI
GAPDFRESSRSQEVLQGQEIMSFNALYDGVDGQNQHPSEIRSCFPGYHSSGIAALGSGIR
DSIATSNNSYKGIGFNESYRFHKVFQGQEIFPSSPYGRIPNANEARENCSLGFSDGVQRS
SSSSRNGWSTLMQGYNTQIRPPAQVSSPSSVLMFQHASNPVPKPSSNFNFNDHVQQTATT
RSWFCGPEMQGGDFKLPAHSEPSVKRGGQWSNSPFGLSHEHLQHGVSQPIVAQSAFRGSQ
DLVSCKSSCRLFGFSLTEDKCLVNKEDNMTLITSPLNPGSSFLPRAGEHFHPKPPAINNA
VGSSCTEAILQTRAENYRIY
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggtgggtatgatagatctcaacactattgaagaagatgaaactacaccgtcttgtggg
tctttatcttctccatcatcatcctctgctgcttctgctttgagtgcttctggctctggt
tctagtacctcttctgtttgtttggagctttggcatgcttgtgctggcccactaatatct
ttgccaaagagagggagtgttgttgtgtatttccctcaaggccacttggaacaactccct
gatttgcctcttgcagtttatgatctcccttctcatgtcttctgtcgagttgttgatgtc
aagctccatgccgaggcagcaagtgatgaggtgtatgcacaggtctccctggttcctgag
agtgaggaaattgagcagaagttgagggaggggatatttgagggggatggtgaggaggag
gatggtgaagccactgtgaagatgacaacaccccatatgttctgtaagaccctaactgct
tctgacactagcactcatggaggcttttcagtccctcgtcgagctgctgaggactgcttc
cctcctctggattatactcaacaaaggccttcacaagagcttgtggcaaaggatcttcat
ggctctgagtggaagtttcgacatatctacaggggtcagccacggaggcatttgctcact
actggatggagtgcgtttgtcaataagaaaaaacttgtctctggggatgccgttctcttt
ctcaggggtgaggatggggaattgagactgggagttcgaagagcagcacaagttaaatgt
ggccctacatttccagctcaatggaatcatcagctgaatcagatctctcctggggatgta
gctaatgctatttctactagaagttttttccacatttactacaatccaagggccagctca
tcagagttcataataccttttaataaattcttgaagagccttgatcaatccttctcttct
ggaatgagattcaaaatgcgttttgaaacagaagatgcagcagagagaagatacactgga
ataataactggagtcagtgagctagatcctgctagatggcctggttcaaaatggaaatgc
ctgttggtaaggtgggatgatatggaggctaacaggctcagcagggtttctccttgggaa
gttgagccttctggttctggttctttttccagttccaataactttacggcacctggtttg
aagaggagcaggtctggattgccttcatcaaaggcagaatttccaattcctgatgggata
ggagcaccagactttagggaatcttcaaggtcccaggaggtcttgcaaggtcaagaaatt
atgagttttaatgctctttatgatggtgttgatggtcagaaccagcacccatctgaaata
aggagttgttttcctggttaccacagttctgggattgctgcattaggaagtggtatcaga
gactcgattgccacttcaaataactcctacaagggcataggctttaacgaatcttataga
ttccataaggtcttccaaggtcaagaaatttttccaagctcaccatatggaagaatccca
aatgctaatgaggctcgtgaaaattgtagtcttggattctctgatggtgtccaaaggtca
agctcaagctcaagaaatggatggtctacattgatgcagggctataatactcaaattcga
cctcctgcacaagtatcatcaccatcttcggtgttaatgtttcagcatgctagcaatcca
gttccaaagccatcttccaattttaatttcaatgatcatgtgcagcagacagctaccacc
cgaagttggttttgtggtcctgaaatgcaggggggggatttcaagttgcctgcacattct
gagcccagtgtaaaaagaggcggccagtggagcaatagtccttttggtctgtcccatgag
catcttcaacatggtgtttcacaacctattgtagctcaatcagcctttaggggtagtcaa
gatttggtgtcgtgcaaaagcagctgcagactctttggtttctcattgactgaggataaa
tgccttgttaataaggaggacaatatgaccttaataacatctccattgaatcctggatcc
tcctttctgcctcgcgcaggagagcacttccatccaaagcctccagcaataaataatgca
gttgggagcagttgtaccgaagcaattctgcaaacccgtgctgaaaattatcgaatatac
taa
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