Populus trichocarpa (black cottonwood): 18103101
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Entry
18103101 CDS
T01077
Name
(RefSeq) pathogenesis-related genes transcriptional activator PTI5
KO
K13433
pathogenesis-related genes transcriptional activator PTI5
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
18103101
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
18103101
Transcription factors [BR:
pop03000
]
Eukaryotic type
Other transcription factors
AP2/ERF
18103101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP2
Motif
Other DBs
NCBI-GeneID:
18103101
NCBI-ProteinID:
XP_024436675
LinkDB
All DBs
Position
11:5095487..5096386
Genome browser
AA seq
183 aa
AA seq
DB search
MVLSSQIHELPFNENDSQDMVIYQMINEASAPNSSTYNILPRSQINTSGMLQPARTVIAK
KHYRGVRRRPWGKYAAEIRDSKRHGARIWLGTFETAEAAALAYDRAAFNMRGSKALLNFP
AEVVAAISTQNCQPIFSSTRTSSKKAMDSCGSSSTITIATSQSESESSTSGESRRQGSDI
LEN
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atggtattaagctcccagatccatgagctcccctttaatgagaatgactcacaagacatg
gtcatatatcagatgatcaacgaggccagcgccccgaatagcagtacatataatatactt
ccgagaagccaaatcaacacttcaggcatgctccaaccagcgaggacagtcatagcaaag
aagcattaccggggcgtgaggcgtcggccatgggggaaatatgctgcagaaattcgtgac
tccaaaagacacggggctcgtatatggctaggcacattcgaaacggcggaggcggctgcc
ctggcttatgatagggctgcttttaacatgcgtggctctaaggccctcctgaattttcca
gctgaagtggtggctgctatatcaactcaaaactgtcagccaatttttagctcaacaagg
acgtcaagtaaaaaagctatggattcatgcggtagctctagcacaataactattgcaaca
tcacaatctgaatcagagagcagcacaagtggggagtcacgccgtcaggggtcggatatc
ctcgagaattaa
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