Populus trichocarpa (black cottonwood): 18103270
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Entry
18103270 CDS
T01077
Name
(RefSeq) cation-chloride cotransporter 1 isoform X3
KO
K14427
solute carrier family 12 (potassium/chloride transporter), member 4/6
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pop02000
]
18103270
Transporters [BR:
pop02000
]
Solute carrier family (SLC)
SLC12: Electroneutral cation-coupled Cl cotransporter
18103270
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GFIT
Motif
Pfam:
AA_permease
SLC12
AA_permease_2
Na_Ala_symp
NAD_binding_6
Motif
Other DBs
NCBI-GeneID:
18103270
NCBI-ProteinID:
XP_006377639
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Position
11:complement(11683331..11705803)
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AA seq
837 aa
AA seq
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MVRMLLSPLIEIAQGIVGMAGIGESLVLVAFCGLCTFLTGISLSAIATNGAMKGGGPYYL
IGRALGPEIGVSIGLCFFLGNAVAGALYVLGAVETFLNAFPAAGLFGEAITTFNGTEVAH
PIQSPSSHDLQIYGIVVTILICFIVFGGVKMINRVAPAFLIPVLFSLFCIFIGIFLAKKD
YPADGITGLSLESFKENWSSDYQFTNNAGIPDPEGKVYWNFNALVGLFFPAVTGIMAGSN
RSASLKDTQRSIPIGTLAATLATTALYLVSVLLFGALATRDALLTDRLLTATVAWPFPAI
IYVGIILSTLGAALQSMTGAPRLLAAIANDEILPVLNYFKVADGHEPHIATLFTAFICVG
CVVIGNLDLITPTVTMFYLLCYAGVNLSCFLLDLLDAPSWRPRWKIHHWSLSLLGASLCI
VIMFLISWSFTVVSLALASLIYYYVSIKGKAGDWGDGFKSAYFQLALRSLRSLGANQVHP
KNWYPIPLVFCRPWGKLPENVPCHPKLADFANCMKKKGRGMSIFVSILDGDYHEHAEDAK
AACKQLSTYIDYKCCEGVAEIVVAPNMSEGFRGIVQTMGLGNLKPNIVVMRYPEIWRREN
LKEIPATFVGIINDCIVANKAVVIVKGLDEWPNEYQMQYGTIDLYWIVRDGGLMLLLSQL
LRTKKSFENCKIQVFCIAEEDSDAEELKADVKKFLYDLRMQAEVIVISMKSWDVQIEGGS
QQDEWSESFTPAQQRIAGYLAEMKRAAQGDENKLMADGKPVVVNEQQVEKFLYTTLKLNS
TILRYSRMAAVVLVSLPPPPVHHPAYFYMEYMDLLVENVPRLLIVRGYRRDVVTLFT
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggatgctcctgtcacctttgatcgagatcgcccaggggattgttggcatggct
ggcataggcgaatctctggtgctggtagcattttgtggtttgtgtactttcctaaccggg
atttcactgagcgctattgcaactaatggtgcaatgaagggtgggggcccatattatctc
attggtcgtgcccttggtcctgagattggagtgagtattggattatgtttcttccttggg
aatgcagttgctggagctctctatgtgttgggagctgtagaaacctttttaaatgccttt
cctgctgctgggctattcggagaggctataacaacatttaatggaacagaagttgcacat
cccatacaaagtccaagttcacatgatctgcaaatttatgggattgttgtgacaattctc
atatgctttatcgtgtttggtggtgtgaagatgatcaatcgagttgcacctgcttttctc
attcctgttttgttctcgttgttctgcatatttattgggatatttttggcgaagaaggac
taccctgccgatggaatcacgggcttgagtttggaaagttttaaagaaaactggagttca
gattatcaatttactaataatgctggcatacctgatcctgaaggaaaggtctactggaat
ttcaatgcgttggttggcctatttttccctgctgtaacgggaattatggcgggctctaat
agatcagcctcacttaaagacacacaacgttcaattcccatcggtacattggctgcaact
cttgcaaccactgcactatatctagtgtctgtgttattatttggagcacttgcaactaga
gatgctctcttgacagacaggctacttacagctactgttgcctggcctttccctgccatc
atctacgttggtatcattctttcaaccttgggtgccgctcttcaaagcatgacaggtgcc
ccacgcctgcttgcagccatagccaatgatgaaattctccctgttcttaactatttcaaa
gttgcagatggacatgagccacacattgctactctctttactgcatttatctgtgttggg
tgtgtcgttattgggaatttagatcttatcacaccaactgtaactatgttttacctttta
tgttatgctggcgtgaacttgtcttgcttccttctagatcttctagatgctcccagttgg
cgaccacggtggaaaattcaccattggagcctctctcttcttggagcatcactatgcata
gttatcatgttcttgatttcttggtcgttcactgttgtgtctctggcactagcaagcctc
atttattattatgtcagcattaaaggaaaggctggggactggggtgatggcttcaagagt
gcatattttcaactagctcttcgcagtcttcgatcgctgggagctaaccaagtgcaccca
aaaaattggtacccaatccctcttgtattctgccggccatggggaaagctgccagaaaat
gttccctgccatcccaagcttgccgactttgccaactgcatgaagaagaaaggccgtggg
atgtccatatttgtctctatactagatggagactatcatgaacatgctgaagatgctaag
gcagcctgtaagcaactaagcacctacattgattacaagtgctgtgagggcgttgcagaa
atagttgtagcccccaatatgtctgaaggttttcgtggaattgtccagactatgggcctt
ggtaacctgaagcccaacattgtggtgatgcggtatcctgaaatctggcggcgtgaaaat
ttaaaagaaatacctgccacttttgttggaataatcaatgactgcatcgttgcaaacaaa
gctgttgttattgtcaagggtcttgatgagtggcccaatgagtatcaaatgcagtacgga
actattgatttgtattggattgtaagagatggtggtctaatgcttcttctttcccagctc
cttcgtactaagaagagttttgagaattgtaagattcaggtcttctgcattgcagaggag
gattcagatgcagaggaactcaaagctgatgtgaagaagtttctctatgatcttcggatg
caggctgaagtgattgtaatatctatgaaatcttgggatgtgcaaatagagggtggatct
caacaagatgaatggtcagaatcatttacacctgctcagcagcgcattgctggctactta
gctgagatgaagagggcggctcagggggatgagaataagctgatggctgatgggaaacct
gtagtagtgaacgagcaacaggtagagaagtttctttacaccaccctgaagctaaattca
acgatattgagatactctagaatggctgctgttgtgctggtgagtctgcccccgcctcca
gtacaccaccctgcttacttttacatggagtacatggatctattagtagagaatgtgcca
aggcttttaatcgtaagaggataccgtagagatgttgtaactctattcacatag
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