Populus trichocarpa (black cottonwood): 18103339
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Entry
18103339 CDS
T01077
Name
(RefSeq) ER lumen protein-retaining receptor
KO
K10949
ER lumen protein retaining receptor
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
18103339
Membrane trafficking [BR:
pop04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
18103339
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ER_lumen_recept
PQ-loop
Motif
Other DBs
NCBI-GeneID:
18103339
NCBI-ProteinID:
XP_006377720
UniProt:
U5G221
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Position
17:4365475..4368935
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AA seq
215 aa
AA seq
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MNIFRLAGDMTHLASVLVLLLKIHTIKSCAGISLKTQELYALVFASRYLDMFTSYVSFYN
TVMKLIFLGSSFSIVWYMRHHKLVRRSYDKDHDTFRHFFIVLPCLILALLIHEKFTFIEV
MWAFSLYLEAVAILPQLVLLQRTRNIDNLTGQYVFLLGAYRALYILNWVFRFFTEPHYVH
WITWISGLVQTLLYADFFYYYFQSWKNNVKLELPA
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgaatatattcagattagcaggggacatgacccatttggctagtgtccttgttttgctc
cttaagatccatactatcaaatcctgtgctggtatttctctaaagacccaggaactctat
gctcttgtttttgcctctcgctacttggatatgttcaccagttatgtctcattctataat
acggtgatgaaattgattttcctgggaagctcattctcaattgtttggtacatgcgacac
cacaagttggttcggagatcttatgataaggatcatgacacctttcggcatttttttatt
gtgctaccctgccttattttggccttgcttatacatgagaaatttacctttatagaggta
atgtgggcattctccttgtatctggaagcagttgccatacttcctcaactagtcttgttg
cagaggacaagaaatattgacaatctgacgggacaatatgtttttctccttggggcatac
agagcattgtacatattaaactgggtttttcgcttcttcacagagccacactatgtccac
tggataacttggatatcaggacttgttcagacattgttgtatgctgatttcttttactat
tatttccagagctggaagaacaacgtgaagctggagttgccggcctga
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integrated database retrieval system
