Populus trichocarpa (black cottonwood): 18103579
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Entry
18103579 CDS
T01077
Name
(RefSeq) peroxisome biogenesis protein 5
KO
K13342
peroxin-5
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
18103579
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
18103579
Membrane trafficking [BR:
pop04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
18103579
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_11
TPR_2
TPR_16
TPR_17
TPR_14
TPR_CcmH_CycH
TPR_8
TPR_19
TPR_7
TPR_12
TPR_9
TPR_20
PPTA
HAT_Syf1_CNRKL1_N
NGF
PEX18_PEX21_C
Motif
Other DBs
NCBI-GeneID:
18103579
NCBI-ProteinID:
XP_024437003
LinkDB
All DBs
Position
11:19275475..19284086
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AA seq
748 aa
AA seq
DB search
MAMRELVTGGAACAVPGSSSSSNPFGALANALIGSSSKTRERVKEIPTSTTTGTEPPFYQ
DATAEDRLRALPGDDFDHSFSHHPTPQSSEFLRGFRSADQNGFADAWEDIHRSGPPPPPA
LLDHRLPPPQFQPPLEGPPQRVLSNFLHSFVGSSHGGIPFRPAPLPALGLSEGDKQCIRD
RSSIMARHFFADKSEDFINAQVNALLSSLDIDGDVRAKGPLAGRFRELEDYWNESQGALR
PGPPQSDGWVAEFSQHRIDHGDPNAWAHSFEQQHGANSWASEFEQEQRLVSAADQMGGAN
ISNLAAMEQTRMLAHTLAQNNDPKFQNSKFLQFVSKMSRGELIIDDNQVKPAALSSSGDW
ATEYQQQYTAGPSWVDEYAGNQLSHGPDQWAKEFAAEREQSGPVDEQWVNEFSKLHVNDW
ADEFGRQVGEGAFGESSADNWADAYDEYLNEQVVAKQKSDASRGVYVFSDMNPYVGHPNP
LKEGQELFRKGLLSEAVLALEAEVLKNPDNAEGWRLLGIAHAENDDDQQAIAAMMRAHEA
GPTNLEVLLALGVSHTNELEQAAALKYLYGWLRHHSKYGTLANPELSDSLYYADVARLFN
EAAEMSPEDADVHIVLGVLYNLSREYDKAISSFQRALKLKPQDYSLWNKLGATQANSVQS
ADAILAYQQALDLKPNYVRAWANMGISYANQGMHEDSIRYYVRALAMNPKADNAWQYLRI
SLSCASRNDMFEACDSRNIDVLQKEFPL
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgcgggagcttgtaacgggaggagcagcttgtgcggttccaggttcttcttct
tcatctaatcctttcggtgctctcgccaacgctcttatcggttcctcttctaagacgcgg
gaaagggtaaaggaaatcccaacctcaacaaccacaggtacagagcctcctttctaccag
gatgccacagctgaggaccgtttgagagcacttccaggagacgactttgatcactccttt
tctcatcatcccactcctcagagttcagagtttcttcgtggctttcgctctgctgatcag
aatggatttgctgatgcctgggaagatattcatcgctctggtcctcctcctccccctgct
ctattggatcaccgcttacctcctcctcaattccaaccacctctcgaaggaccaccccaa
agagtgttgtcaaactttttgcactcctttgtgggcagtagccatggtggaattccgttt
cgtcctgctccactaccagcattgggattgtctgaaggtgacaaacaatgcatacgtgat
cgtagcagcataatggcccgacatttttttgctgataagagtgaagattttatcaatgca
caggtgaatgcacttctgtcttcattagatattgatggtgatgtgcgggctaagggacct
ttagctggcagattccgagagctagaggattactggaatgagtctcaaggtgctctgaga
cctggtcctcctcaatctgatggatgggttgcagaatttagccaacacagaatagaccat
ggtgatcctaatgcttgggctcactcgtttgaacagcagcatggtgctaatagctgggcc
tctgagtttgagcaggaacaacgactggtctcagcagcagatcaaatgggaggtgcaaat
atctcaaacttagctgcaatggagcagactcgtatgcttgcacacacactagctcaaaac
aacgaccccaaatttcagaattctaagtttcttcaatttgtctcaaagatgagtcgtgga
gaacttattattgatgataatcaagtcaagccagctgcactgtcttcatcaggagattgg
gcaacagaatatcagcaacaatatactgcaggtccttcctgggttgatgaatatgcaggc
aatcagctttctcatggacctgatcaatgggcgaaagagtttgcagctgaaagagagcaa
agtggacctgttgatgaacagtgggtaaatgaattctcaaagttgcatgttaatgactgg
gcagacgaatttggacggcaggttggagaaggggcttttggagagagttcggctgataat
tgggcagatgcgtatgatgagtacctaaatgagcaagtagttgccaagcagaagtcagat
gcttcaaggggcgtttatgtgttttcagacatgaatccttatgttggtcatccgaaccct
ttgaaagaaggccaggaactattccgcaaggggcttttgagtgaagcagtgcttgcttta
gaggctgaagttttgaaaaacccagataatgctgaaggttggaggctgcttggaatagca
catgcagagaatgatgatgatcaacaggctattgcagccatgatgcgtgctcatgaggcc
ggtcctacaaatcttgaagttcttcttgctctaggcgtgagccatacaaatgagttggag
caggcagctgcattgaaatatttatatggatggctacgacatcattcaaagtatggaaca
cttgccaatccagagctttctgattctttgtattatgcagatgttgctagattattcaat
gaagctgctgagatgtcacccgaggatgctgacgtgcacatagtacttggtgtcctgtac
aatttgtcacgggaatatgacaaagccatttcttctttccagagagctttgaaactcaag
cctcaggattactctctttggaacaagcttggtgcaacacaagccaacagtgttcagagt
gctgatgcgatattggcttatcagcaggcacttgatctgaagcctaactatgtccgagca
tgggcgaacatgggaatcagttatgccaaccagggtatgcatgaggattccatccgttac
tatgttcgggcacttgctatgaatcccaaggcagataatgcttggcaatatttgagaatt
tctttaagctgtgcttctaggaatgacatgtttgaagcttgtgattctcgaaatattgat
gttctacagaaggagttcccgctataa
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