Populus trichocarpa (black cottonwood): 18103839
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Entry
18103839 CDS
T01077
Name
(RefSeq) superoxide dismutase [Fe], chloroplastic isoform X1
KO
K04564
superoxide dismutase, Fe-Mn family [EC:
1.15.1.1
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
18103839
Enzymes [BR:
pop01000
]
1. Oxidoreductases
1.15 Acting on superoxide as acceptor
1.15.1 Acting on superoxide as acceptor (only sub-subclass identified to date)
1.15.1.1 superoxide dismutase
18103839
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Paralog
GFIT
Motif
Pfam:
Sod_Fe_N
Sod_Fe_C
Motif
Other DBs
NCBI-GeneID:
18103839
NCBI-ProteinID:
XP_024438181
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Position
12:complement(13161338..13163924)
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AA seq
191 aa
AA seq
DB search
MFFLPSLSFFFLHPTQCFLAFQVLQQLVCCDGQRVASITRSRQCTRKADALTVTAKFELK
PPPYPMDDLEPHMSKDTFEYHRGKHHRAYVDNLNKQIDGTERDDMSLDDVVLVTYNKGGP
LPAFNNAAQAWNHEFFLESMKPGGGGKASGELLHLIERDFGSFDRFVQEFKSAAATQFGS
GWAWLVSTPYN
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgtttttcttaccttcactctcttttttctttcttcatccgactcagtgttttcttgca
tttcaggtcttacagcaactggtgtgctgcgatggacagagggttgccagtattacacgt
tcgaggcaatgtaccagaaaggctgatgctttgacagttacagctaaatttgagctgaaa
cctcctccatatcccatggatgatttagagccgcatatgagcaaggacacatttgagtat
caccggggaaagcatcacagggcttatgtggataacttaaacaagcaaattgacggaaca
gaacgagatgacatgtccttagatgatgttgtgctcgttacatacaacaagggtggtcca
cttcctgctttcaacaatgctgcacaggcatggaaccatgaattctttttggaatccatg
aaaccgggaggtggaggaaaggcatcaggggaacttcttcacttgattgaaagagatttt
ggttcttttgatagatttgtgcaagagttcaagtcggctgcagctactcagtttggttct
ggatgggcttggcttgtttccactccatacaattga
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