KEGG   Populus trichocarpa (black cottonwood): 18103881
Entry
18103881          CDS       T01077                                 
Name
(RefSeq) ras-related protein RABF2a isoform X2
  KO
K07887  Ras-related protein Rab-5A
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop04144  Endocytosis
pop04145  Phagosome
pop04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:pop00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    18103881
   04145 Phagosome
    18103881
   04148 Efferocytosis
    18103881
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pop04131]
    18103881
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pop04147]
    18103881
   04031 GTP-binding proteins [BR:pop04031]
    18103881
Membrane trafficking [BR:pop04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    18103881
 Endosome - Lysosome transport
    18103881
Exosome [BR:pop04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   18103881
  Exosomal proteins of other body fluids (saliva and urine)
   18103881
  Exosomal proteins of colorectal cancer cells
   18103881
  Exosomal proteins of bladder cancer cells
   18103881
GTP-binding proteins [BR:pop04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    18103881
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU RsgA_GTPase MMR_HSR1 Gtr1_RagA AAA_24 AAA_16 TsaE
Other DBs
NCBI-GeneID: 18103881
NCBI-ProteinID: XP_006376988
UniProt: B9NA46
LinkDB
Position
12:13636397..13640861
AA seq 200 aa
MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK
FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDISNQASFERAKKWVQELQAQGNPNMVMAL
AGNKADLLDARKVTAEEAQVYAQEYGLFFIETSAKTATNVNDIFYEIAKRLPRVQPAPNP
SGMVLMDRPTESTASASCCS
NT seq 603 nt   +upstreamnt  +downstreamnt
atggccaccactggaaacaagaatatcaatgctaaattggtgcttctcggggatgttggt
gctggtaagtccagtctcgtattgcgttttgtcaaaggacagtttgttgagtttcaggaa
tcaaccataggtgctgcctttttctcgcaaacattggctgtcaatgatgcaactgtaaaa
tttgagatttgggacacagcaggccaggagagataccacagcctggctccaatgtactac
aggggagctgctgcagcaatcattgtgtatgatatatctaatcaggcctcatttgagcgg
gcgaaaaaatgggttcaagaacttcaggcacaaggcaacccaaatatggttatggcactt
gcagggaacaaagctgatttgctggatgcaaggaaggttactgctgaggaagcacaagtt
tatgcccaggagtatggccttttctttattgaaacatcagcaaaaactgcaaccaatgtc
aatgacattttctatgaaatagcaaaaagactacctcgagtacagccagcaccaaaccct
tctggtatggttcttatggatagacctactgaaagtacagcaagtgcatcttgctgctct
taa

DBGET integrated database retrieval system