Populus trichocarpa (black cottonwood): 18103955
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Entry
18103955 CDS
T01077
Name
(RefSeq) chalcone synthase
KO
K00660
chalcone synthase [EC:
2.3.1.74
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00941
Flavonoid biosynthesis
pop00960
Tropane, piperidine and pyridine alkaloid biosynthesis
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
pop04712
Circadian rhythm - plant
Module
pop_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09110 Biosynthesis of other secondary metabolites
00941 Flavonoid biosynthesis
18103955
00960 Tropane, piperidine and pyridine alkaloid biosynthesis
18103955
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
18103955
09180 Brite Hierarchies
09181 Protein families: metabolism
01008 Polyketide biosynthesis proteins [BR:
pop01008
]
18103955
Enzymes [BR:
pop01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.74 chalcone synthase
18103955
Polyketide biosynthesis proteins [BR:
pop01008
]
Polyketide synthase (PKS)
Type III PKS
Plant type
18103955
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Chal_sti_synt_N
Chal_sti_synt_C
ACP_syn_III
ACP_syn_III_C
FAE1_CUT1_RppA
Motif
Other DBs
NCBI-GeneID:
18103955
NCBI-ProteinID:
XP_006377074
UniProt:
B9ND63
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Position
12:complement(15158606..15160160)
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AA seq
395 aa
AA seq
DB search
MALVDEIRKAQRARGPAMVLAIGTAVPVNCFYQADYPDYFFRVTKTENLTELKAKFERIC
QKSMINKRYMHLTEEMIKENPEIGNFMTPSLNVRQDIVLAEVPKLGKEAALKAIQEWGHP
MSKITHLVFCTTSGVHMPGADYQLANLLGLSSSIKRLMLYQQGCYGGGTALRVAKDLAEN
NAGARVLVVCSEITAITFHAPNEDQLGCLVGQALFGDGAGAAIIGSDPDTLVEKPIFQLV
SAAQIMIPDSEHAIEGHVREMGLLIHLSEDVPKLISDNVEAALREVVTPIGGVLSDWNSL
FWAVHAGGRAILDGVEAKLKLKKEKLGVTRHILREYGNVASACVLFVLDEMRERSVREGK
ATTGEGLEWGVVIGLGPGLTMETLVLHSVPVAITK
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggcactggtagacgagattcggaaagcgcagcgcgctcgaggtccagcaatggtccta
gcaattggcactgcagtgcctgtaaattgtttctaccaggctgactatcctgattacttc
tttcgagtcaccaaaactgagaacttaactgagctaaaagccaagttcgagcgtatatgt
caaaaatcaatgatcaacaaacgctacatgcacctcacggaagaaatgatcaaagaaaac
cctgaaattggtaactttatgactccttctctcaatgtacgtcaggatatagtacttgca
gaggtgcccaagcttggaaaggaagcagctctgaaagctatccaagaatgggggcacccc
atgtcaaagatcacacacctggtattctgcacaacttcaggtgtacacatgcctggtgca
gactatcaactagccaacctgctcggtctctcatcatcgatcaaaaggctgatgctgtat
caacaaggctgctatgggggtgggactgccctccgagttgctaaggatcttgccgaaaac
aatgccggtgctcgagttcttgtcgtgtgctctgaaattacagcaattacttttcacgct
ccaaatgaagatcagttaggttgcctcgttgggcaagctcttttcggtgatggagcagga
gcagcaatcatcggctcagatcctgacacgctggttgaaaagccgatatttcaacttgtt
tcggcagcacagattatgattcctgactcggaacatgcaatcgaagggcatgtacgcgaa
atggggctactgatccatttatcagaggatgtgcctaaactgatatccgacaacgttgaa
gcggctctacgtgaagttgttaccccaattggtggtgttttaagtgattggaactcatta
ttttgggctgtgcatgcgggtgggcgggcaatccttgacggagtagaagcaaaacttaag
ttgaaaaaagagaaacttggtgttaccaggcacatcctgagggagtatggtaatgtagcg
agtgcttgtgtattatttgtacttgacgagatgagggagagatctgtcagggaaggcaag
gccactacaggagaaggattggagtggggagtcgtgatcgggttgggacctggtctaacc
atggagacgcttgtattgcacagtgtccctgttgccatcacaaagtaa
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