Populus trichocarpa (black cottonwood): 18104011
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Entry
18104011 CDS
T01077
Name
(RefSeq) acyl-CoA-binding domain-containing protein 4
KO
K20285
Rab9 effector protein with kelch motifs
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
18104011
Membrane trafficking [BR:
pop04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
18104011
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Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Kelch_3
Beta-prop_ATRN-LZTR1
Kelch_4
Kelch_1
Kelch_5
Kelch_6
Kelch_2
NANM
FRG1
Motif
Other DBs
NCBI-GeneID:
18104011
NCBI-ProteinID:
XP_024439073
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Position
13:526141..529920
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AA seq
648 aa
AA seq
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MGSLGGETAKKKAMWLYPKVLGFNPSERWGHSACYSHGIVYVFGGCCGGLDFSDVLMLNL
DTMLWNTMATTGQGPGPRDSHSAVLVGRQMIVFGGTNGSKKVNDLHVLDLGTKEWMSPEC
KGNPPSPRESHTATLIGDDKIMIFGGSGEGEANYLNDLHVLDLKSMRWTSPEVKGSIPAA
RDSHSAVAIGSKLFVYGGDRGDRFHGDVDVLDTDTMTWTKLAVQGSAPGVRAGHTAVNIG
TKVYVIGGVGDKHYYNDVWVLDVSACSWTKLDISGQQPQGRFSHTAVVTDLNIAIYGGCR
EDERPLNQLLVLQLEAEHPNGRYNISMCKIFGNHWNQEKRRFLRGAANNSTMFPGNNEIV
GKGSQESEESKQPFQFSSDTLHPTKKRTTNLKAWEIDSEQEEHSLSLSQHSSPSQSDQEQ
FPVHRSVDSLTSCQGLNFFRQLNKIPRNCRADDVASNQKQPITIVERTPYSLQISRENKR
AEQYVHAGLGRQGTPFPPMEHRPVEAGSIQNLVGAEVRGKVDGAFDSGLLMTATVNGKIF
RGVLFAPAPCVAPGRAILAQNHASQGTQIHTVQQFPNSNHIDSLKPSHHPTTFPKPESGQ
SFRQTQMTRTYPVIRAAPSLGKEPKPRSDLQGVILTLGGPASGHVGQV
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgggctctctgggaggtgaaactgcgaagaagaaagcaatgtggctctatcctaaggtt
ttaggatttaacccttctgaaagatggggtcattctgcttgctactctcatgggattgtt
tatgtctttggtggatgttgcgggggtctggatttcagtgatgttctcatgctaaatcta
gatacaatgctttggaacacaatggcaactacaggtcaagggcctggtccaagagacagc
cacagtgctgttcttgtgggccgacaaatgatcgtgtttgggggcacgaatggctctaag
aaggtgaatgatcttcatgtattggaccttgggaccaaggagtggatgagccctgaatgc
aaagggaatcctccttcgcctcgcgaaagtcacactgcaacactgattggtgatgacaaa
atcatgatatttggcggaagtggagaaggtgaagcaaattatttaaacgatttgcatgtt
ttggacctcaagtccatgagatggacttctccggaggtgaaaggaagtattcctgctgct
agggatagtcacagtgctgttgcaattggcagtaagctttttgtatacggtggtgatcgc
ggtgataggtttcatggtgatgtggatgttctggatacagatacaatgacttggacaaag
cttgctgttcaaggatctgcgccaggcgttagagcaggccatactgctgtgaatattggg
acaaaggtttatgtcattggaggtgttggggacaagcattactacaatgatgtctgggta
cttgatgtgagtgcctgttcatggactaagcttgatatatctgggcagcaacctcaaggg
aggttttctcacactgcggttgttacggacttaaatattgccatctatggagggtgcaga
gaggatgagcgtcctctcaaccagctgttggtgttgcaacttgaagcagaacatcccaat
ggtcgatacaacatttccatgtgcaagatctttggaaaccattggaatcaagaaaagaga
agatttctccgaggagctgcgaacaattcgacaatgtttccggggaacaatgaaatagtc
ggaaagggctctcaagaatcagaagaatcaaaacaaccttttcagttcagttcagatact
ctgcatcctacgaagaaaagaactacaaatcttaaggcatgggagattgattcagaacaa
gaagagcattctctttctctttctcaacattcatccccatcacaatctgatcaagaacag
ttcccagttcatagatcagttgattccctcacatcctgccaaggacttaatttttttagg
cagttaaacaaaattccgagaaattgccgggctgatgatgttgcgagtaaccagaaacaa
cctataactatagtcgaaagaaccccgtacagtcttcaaatttcaagagagaataagaga
gcagaacagtatgttcatgctgggcttggcaggcaaggaacaccattcccaccaatggaa
catagacccgtggaggcagggtcaattcaaaacctggttggtgctgaggtccgaggaaaa
gttgacggagccttcgactcaggccttctaatgactgcaactgtcaatggaaagattttt
agaggggtcttgtttgcacctgcaccctgtgtagctccaggaagggccattctagctcaa
aatcatgcatctcaaggaacgcaaatccacactgtccagcagtttccaaactcaaatcat
atagattccttaaagccctctcatcatccaacaacattccccaagccagaatctggtcag
agttttcgacaaactcaaatgacaagaacatatccggtaattagagctgctccatcatta
ggcaaagaaccaaagccaaggagtgatcttcaaggtgtgattctaacactaggaggacct
gcaagtggtcatgttggacaagtttaa
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