Populus trichocarpa (black cottonwood): 18104108
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Entry
18104108 CDS
T01077
Name
(RefSeq) LOW QUALITY PROTEIN: tyrosine decarboxylase 1
KO
K01593
aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:
4.1.1.28
4.1.1.105
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00350
Tyrosine metabolism
pop00360
Phenylalanine metabolism
pop00380
Tryptophan metabolism
pop00901
Indole alkaloid biosynthesis
pop00950
Isoquinoline alkaloid biosynthesis
pop00965
Betalain biosynthesis
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09105 Amino acid metabolism
00350 Tyrosine metabolism
18104108
00360 Phenylalanine metabolism
18104108
00380 Tryptophan metabolism
18104108
09110 Biosynthesis of other secondary metabolites
00901 Indole alkaloid biosynthesis
18104108
00950 Isoquinoline alkaloid biosynthesis
18104108
00965 Betalain biosynthesis
18104108
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pop04147
]
18104108
Enzymes [BR:
pop01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.28 aromatic-L-amino-acid decarboxylase
18104108
4.1.1.105 L-tryptophan decarboxylase
18104108
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
18104108
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
18104108
NCBI-ProteinID:
XP_006375876
UniProt:
U5FR59
LinkDB
All DBs
Position
13:3848465..3850138
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AA seq
493 aa
AA seq
DB search
MGSLSTNTFSPLDPNGFTNDSKMVIDFIADYYKNIENNPVQSQVKPGYLLTQLPDTAPYC
EESLEDVLKDVTDSIIPGLTHWQSPNFFAYFQANASTAGFVGEMLCTGLNVVGFNWIASP
AATELESIVMDWMGKMLKLPSTFLFSGNGGGVLHGSTCEAIVCTLVAARDETLRMIGAEN
ITKLVVYASDQTHSTLLKGVKLVGIPSSNFRCLSTSFSSEFSLSPQALEDAIENDIKAGL
VPLFLCATVGTTACGAVDPVMDLGEIARKYNLWFHIDAAYAGSACICPEFRHYLDGVELA
DSLSMNPHKWLLTNMDCCCLWVKQPRLLIESLSSDAEFLRNNASESSDVVDYKDWQIALS
RRFRALKLWIVIRRHGLANLMCHIRSDVNLAKRFESLVAKDSRFEVVVRRRFSLVCFRLK
HNDECQGLELNRKLLAAVNESGRAFMTHAVVGGLFIIRCAIGSTLTEERHVDDLWKLIQE
KAADLVKETGAIG
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgggttctctatccacaaacactttctcccctttagacccaaatggtttcaccaatgat
tccaaaatggtgatcgatttcattgctgattattacaagaatattgaaaacaacccggtt
caaagccaagtgaaaccagggtacttattgacccaattgccagacactgccccatattgc
gaggaatccttagaagatgttctcaaagatgtaactgatagcattatcccaggcctcact
cattggcaaagccctaacttctttgcttacttccaagcaaatgcaagcactgcagggttt
gttggtgagatgctctgcacaggccttaatgttgttggcttcaactggattgcatctcct
gctgctaccgaactggaatccattgtaatggactggatgggaaagatgctcaagctccca
tctacttttttgttctcaggaaacggaggtggtgtcttgcacggtagcacttgtgaggct
atagtttgcaccctagttgcagcaagagacgagaccttgagaatgattggagctgaaaac
attacgaagctggtagtttatgcctctgatcaaacccattcaactctacttaagggcgtc
aaattagttggaattccatcctctaattttcgatgcctctctacctcattttcatcggaa
ttttcgttgtcacctcaagcattggaagatgcaattgaaaatgatatcaaagctggactt
gtgcccttatttttatgcgctactgtaggcactacagcatgtggagctgttgatcctgtt
atggatctgggggaaattgccaggaaatataatctatggttccacattgatgcagcttac
gcaggtagtgcatgcatatgccctgaattcaggcattacctggatggagtagaacttgca
gactcgttgagcatgaatccacataaatggttactcactaacatggattgttgctgcttg
tgggttaagcagcctcgtttattaatcgagtcactgtccagtgatgcagaattcttgagg
aacaatgccagtgaatcaagtgacgtcgtggactacaaagattggcaaattgcattgagt
aggcgattcagagctctgaagctttggattgtgattcgcaggcatggattagcaaacctt
atgtgccatattcgtagcgatgtgaacttggctaagcggtttgagtcactggtggctaaa
gacagtaggtttgaggtggtggtgcgaaggaggttttctctggtttgttttaggctgaag
cacaacgatgaatgccaaggcttggaattgaaccgtaagcttctagctgcagtgaatgaa
agtggtcgtgcattcatgactcacgcggtggttggtggcttgtttatcatacgctgtgcg
atcggatcaaccttgactgaagaacgacatgtagatgatttgtggaagttgattcaagaa
aaggcagcagatcttgtcaaagaaacaggtgctattggataa
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