Populus trichocarpa (black cottonwood): 18104217
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Entry
18104217 CDS
T01077
Name
(RefSeq) BTB/POZ domain-containing protein At3g56230 isoform X1
KO
K10523
speckle-type POZ protein
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
18104217
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
18104217
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Gene cluster
GFIT
Motif
Pfam:
BTB
BTB_KLHL33
BACK
BACK_BPM_SPOP
DUF5556
Motif
Other DBs
NCBI-GeneID:
18104217
NCBI-ProteinID:
XP_024439106
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Position
13:7535954..7537389
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AA seq
273 aa
AA seq
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MDCSICCSMPLILRPPRNTICGACYEGAKSVITLMNKLESDETADKATNSLPSSPNPCKP
QPLANIPRWMISMKDRESELNEKISFLSSFIALFKDQILTDIQLKPGNDGPSISAHRALL
AARSEIFKNMLDSDAYKAPASDTIMLPELNHQELESLLEFLYSGNLPSEKLEKHVYSLTL
AADKYDIPYLLKFCERHMLRFLNSSNALDVLEISDTCSNKTLKETALNFIVKNMEDVVFS
TKYEAFVPENPHLAVQITRALLMDVKNRRNSGV
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggactgctcaatttgttgctctatgccattgatcttaaggcctccaaggaataccatt
tgcggagcatgctacgagggagctaagagcgtcatcaccttgatgaacaagcttgaaagt
gatgaaacagctgacaaggccaccaattctctaccttcttcgccaaatccgtgtaagcct
cagccacttgctaatattccaagatggatgattagtatgaaggatagagaatctgaactg
aatgagaagataagttttctcagtagctttattgccttatttaaagatcaaattctcacg
gacatacaactcaagcctggcaatgatgggccttccatatctgcacacagagcattactg
gcagcaagatctgaaatatttaagaacatgctggactcagatgcctacaaagctcctgca
agcgacaccataatgctccctgaattgaaccatcaagagcttgagtctctattagaattt
ctttacagtggaaacttgcctagcgaaaagctggagaagcatgtctactcattgaccctt
gcagctgacaaatatgatattccatacctgctcaaattttgcgaaaggcatatgctcaga
ttcctgaactcatctaatgctcttgacgtgttagaaatctcggatacatgttccaacaaa
acactaaaggagactgccttgaatttcattgtaaaaaacatggaggatgtagttttttct
actaaatatgaagcttttgtaccggagaacccacatttagctgtgcagattacgagggct
cttttgatggatgtcaaaaatagaagaaatagtggagtttga
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