Populus trichocarpa (black cottonwood): 18104387
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Entry
18104387 CDS
T01077
Name
(RefSeq) phenylalanine--tRNA ligase, chloroplastic/mitochondrial
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
18104387
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pop01007
]
18104387
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pop03016
]
18104387
Enzymes [BR:
pop01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
18104387
Amino acid related enzymes [BR:
pop01007
]
Aminoacyl-tRNA synthetase
Class II (U)
18104387
Transfer RNA biogenesis [BR:
pop03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
18104387
Prokaryotic type
18104387
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2d
FDX-ACB
Motif
Other DBs
NCBI-GeneID:
18104387
NCBI-ProteinID:
XP_006376212
UniProt:
A0A2K1Y3X4
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Position
13:complement(11427181..11431759)
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AA seq
426 aa
AA seq
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MALSLVHSTLFSKTSQLFLHTKTGFSHFSSSIPFSSSALPSNPKTWRRPVISVLELGGVK
IARDDVVRDDPTNNVPDTIFSKLGLQLHRRDQHPLGILKNTIYDYFDTNYSNKFDKFDEL
CPIVSVKQNFDDVLVPADHVSRSYNDTYYVDSQTVLRCHTSAHQAELLRKGHTHFLVTGD
VYRRDSIDSTHYPVFHQMEGFRVFSPDEWEASGVDGTSFAAEDLKKCLEGLATHLFGAVE
MRWVDTYFPFTNPSFELEIYFQEKWLEVLGCGVTEQEILKRNGKLNNVAWAFGLGLERLA
MVLFDIPDIRLFWSNDERFTSQFSKGQLGIKFKPFSKYPPCYKDMSFWINESFTENNLCE
VVRGIAGDLVEEVSLIDNFSNKKGMTSHCYRIAYRSMERSLTDEEINDLQMSVREQVQSK
LNVVLR
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggctctgtctctagtccactccactctcttctccaaaacttcccaactctttctccac
actaaaactggattctctcacttctcttcctctatccctttctcctcctctgctctccct
tcaaaccccaaaacttggagacgacctgtcatttctgttcttgaacttggtggtgtcaag
attgccagagatgatgtggtgagggatgaccctacaaataatgtaccggatacaatattt
tctaagcttggattgcaacttcataggagggatcaacatccacttggaattttgaagaat
acgatatatgactattttgataccaattactcaaataagttcgacaagtttgacgaactt
tgcccaattgtttctgttaaacagaattttgatgatgtcttggttccagctgatcatgta
agcaggagctataatgacacatactatgttgactctcaaactgttttaagatgccataca
agtgcacatcaggcagagctgttgaggaagggtcacactcactttcttgtaactggagat
gtctatcgcagagattctattgattcaactcactaccctgttttccatcagatggaaggg
tttcgtgttttttctcctgatgaatgggaggcatctggcgtggatggcacatcttttgca
gctgaggatttaaagaaatgtcttgagggtttggcaacacatttatttggtgctgtggag
atgcgctgggttgatacatattttcctttcaccaatccatcgtttgaacttgagatatat
tttcaggagaagtggctggaagttttaggctgtggggtgacagagcaagaaattttaaag
aggaatggaaaacttaataatgttgcttgggcttttggacttggtttggagcgacttgca
atggttctgtttgatatccctgatatccggcttttctggtcaaatgatgagcgatttact
tctcagttttctaaaggtcagctaggaatcaaattcaagccattctcaaagtatcctcct
tgttacaaggacatgagtttttggatcaatgaatcatttacagaaaacaatttatgtgaa
gttgtcagaggaattgctggggatcttgttgaggaggtgagcttgatagacaatttttca
aacaagaaaggaatgacaagtcactgctacaggattgcttaccgatccatggaacgttca
cttactgatgaggagatcaatgatttgcagatgtctgtgagagaacaggtgcaaagcaag
ctaaatgtcgtgctaagatga
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