Populus trichocarpa (black cottonwood): 18104501
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Entry
18104501 CDS
T01077
Name
(RefSeq) somatic embryogenesis receptor kinase 2
KO
K13418
somatic embryogenesis receptor kinase 1 [EC:
2.7.10.1
2.7.11.1
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pop01001
]
18104501
Enzymes [BR:
pop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
18104501
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
18104501
Protein kinases [BR:
pop01001
]
Serine/threonine kinases: TKL group
IRAK family
18104501
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
LRR_1
LRRNT_2
LRR_14
LRR_8
LRR_4
ABC1
LRR_LRWD1
Pkinase_fungal
APH
Motif
Other DBs
NCBI-GeneID:
18104501
NCBI-ProteinID:
XP_006376338
UniProt:
U5FSY7
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Position
13:complement(12553455..12561296)
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AA seq
627 aa
AA seq
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MERKVGNFLFVWLLILALLLHPVWLVLGNMEGDALHSLRSNLNDPNNVLQSWDPTLVNPC
TWFHVTCNNDNSVIRVDLGNAALSGQLVPQLGLLKNLQYLELYSNNISGPIPGDLGNLTT
LVSLDLYLNSFTGPIPDTLGKLSKLRFLRLNNNSLTGPIPMSLTNISALQVLDLSNNRLS
GVVPDNGSFSLFTPISFANNLDLCGPVTGHPCPGSPPFSPPPPFVPPPPISSPGGYSATG
AIAGGVAAGAALLFAAPALAFAWWRRRKPQEFFFDVPAEEDPEVHLGQLKRFSLRELQVA
TDTFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRN
LLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQPPLDWPTRKRIALGSARGLSYLH
DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLS
TGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPD
LQNKYVEAEVEQLIQVALLCTQGSPMERPKMSDVVRMLEGDGLAERWDEWQKVEVLRQEV
ELAPHPNSDWIVDSTENLHAVELSGPR
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggagaggaaagttgggaactttctttttgtgtggttgttgatcttggcgttgctgctg
catccagtatggctggttttgggtaatatggaaggtgatgctttgcatagcctgaggagc
aatttgaatgatccaaacaatgtcctgcagagttgggatcctacccttgtcaacccatgc
acgtggtttcatgtcacctgtaacaatgataatagtgttataagagttgatcttggaaat
gctgctttatctggtcagcttgttccacagcttggcctgcttaagaacttgcaatacttg
gaactctacagtaataacataagcggaccaattcctggtgatcttggaaatttgactacc
ctggtgagcttggatctttacttgaatagttttactggtcccattccagacactttgggc
aagctgtcaaaattgcgattccttcggcttaataacaatagtttgacggggccaattcca
atgtcattgactaatatctcagctcttcaagtactggatctttcaaacaaccgcctctct
ggagtggttccagataatggttccttttcactattcactcccataagttttgctaacaac
ttggatctgtgtggaccagttactggtcatccctgcccagggtctcctccattttctccc
cctcctccatttgtcccaccacctccaatttcttcaccaggagggtatagtgccactgga
gcaattgctggaggagttgcagctggtgcagccttactgtttgctgccccagcattggca
tttgcttggtggcgtcggaggaaacctcaagagttcttctttgatgtgcctgctgaagag
gatcctgaagttcatctaggacagcttaaaaggttttctctgagagaattacaagttgca
acggatacctttagcaacaaaaatattctgggtagaggagggtttggtaaggtttacaaa
ggacgtctagcagatggctcgctggtggctgtaaaaagacttaaagaagagcgtacgcct
ggaggggagctacagtttcaaacagaagtagagatgataagcatggctgtgcatcggaat
ctcctccggttacgtggcttttgcatgacaccaactgaaagactgcttgtttatccctac
atggctaatggaagtgttgcatcatgtttgagggaacgcccaccttcacagcctcctcta
gattggccaacgcgaaagcgaattgcgttgggatctgcaaggggtttatcttatttgcat
gatcattgtgacccaaagattattcatcgggatgttaaagctgcaaatattttgttggac
gaggaattcgaggctgttgttggggattttgggctggcaaaattgatggactacaaggat
actcatgtcaccactgctgtccgtggtacaataggacacattgctccagagtacctatct
actggtaaatcatctgagaaaactgatgtttttgggtatggaatcatgcttctggagcta
attactggacagagggcttttgaccttgcccggctggcaaatgatgacgatgtcatgtta
cttgattgggtaaaaggacttctcaaggagaaaaagctagaaatgctagtcgatcctgat
ctccaaaacaaatatgtggaagctgaggtggagcaactaatccaggttgccctgctctgc
actcaaggctccccaatggagcggcctaagatgtcggatgtggtgagaatgcttgaaggt
gatggtttggcagagagatgggatgagtggcaaaaggttgaagttctacgtcaggaggtg
gaattagctcctcatcctaattctgactggattgttgactccacagaaaatctacatgca
gtcgaattatctggtccgaggtga
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