Populus trichocarpa (black cottonwood): 18104558
Help
Entry
18104558 CDS
T01077
Name
(RefSeq) ras-related protein RABA1f
KO
K07904
Ras-related protein Rab-11A
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
18104558
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
18104558
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pop04147
]
18104558
04031 GTP-binding proteins [BR:
pop04031
]
18104558
Membrane trafficking [BR:
pop04131
]
Protein recycling
Rab GTPases and associated proteins
Rab GTPases
18104558
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
18104558
Exosomal proteins of colorectal cancer cells
18104558
GTP-binding proteins [BR:
pop04031
]
Small (monomeric) G-proteins
Rab Family
Rab11/25 [OT]
18104558
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
RsgA_GTPase
AAA_22
Gtr1_RagA
DLIC
AAA_16
AAA_14
ABC_tran
AAA_24
MCM
PduV-EutP
TniB
FeoB_N
DUF6231
Motif
Other DBs
NCBI-GeneID:
18104558
NCBI-ProteinID:
XP_006376403
LinkDB
All DBs
Position
13:complement(13226076..13228116)
Genome browser
AA seq
216 aa
AA seq
DB search
MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDK
VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTESNIV
IMLVGNKADLRHLRAVTTEDATAFAERENTFFMETSALESLNVENAFTEVLTQIYHVVSR
KALDVGDDPAALPKGQTINVGKDDVSAVKKVGCCSA
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcttacagggctgatgatgactatgattatctattcaaggtagtgttaataggt
gattctggtgttggaaaatccaatcttttgtcaagatttacgaaaaatgaattcagtttg
gaatccaaatccactattggtgttgaatttgccacacgtagtatccatgttgatgataaa
gttgtcaaggctcagatttgggacactgctggccaagaaagataccgtgcaattactagt
gcatattatcgaggagccgttggtgccttgcttgtctatgatgtcactcgacatgtcact
tttgagaacgtggagagatggctaaaggagcttcgtgatcacaccgaatccaacatcgtg
attatgcttgtgggaaacaaggcagatttgcgtcacttgcgtgcagttactactgaggat
gccactgcatttgctgagagagagaacacttttttcatggagacctctgccctggagtcc
ttgaatgttgaaaatgctttcacagaagtgctcactcagatttatcatgtagtcagccgg
aaggctcttgatgttggggatgaccctgcagccttgcccaagggacagactattaatgtt
ggcaaagatgatgtatcagctgtgaaaaaggttggatgctgctccgcatag
DBGET
integrated database retrieval system
