Populus trichocarpa (black cottonwood): 18104608
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Entry
18104608 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC18104608 isoform X1
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pop03021
]
18104608
Transcription machinery [BR:
pop03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
18104608
TFIIIC, fungi type
18104608
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_14
TPR_2
TPR_19
TPR_8
TPR_16
TPR_1
TPR_12
TPR_6
TPR_9
TPR_7
TPR_11
TPR_CcmH_CycH
ANAPC3
TPR_10
TPR_NUP160_120_M
Alkyl_sulf_dimr
NatA_aux_su
DUF2240
HAT_PRP39_C
Motif
Other DBs
NCBI-GeneID:
18104608
NCBI-ProteinID:
XP_052302265
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Position
13:complement(13587592..13627416)
Genome browser
AA seq
909 aa
AA seq
DB search
MESKGSEIDEFEKALESALDGSTEEEEEDENEEGEYSDDDEEEEDDDDEEEEEEEENALD
SMEQNQQFEYEALAEKKRKTLADAKGEGSAKKARQEDMTGASLAEIEEIMNFGMRKKRRR
RMPKRRGRRKGSKNKLSPEITRMLGDATLHYAHGNYEEALTVLSEVVKRAPLVADSYHTL
GLVHKALGNTEKAMKFYRIAAFLRPKDSSLWKLLFSWHVEQGDIARAWKCLSKAISADPD
DISLRSLHALFYDELGDHQRAAESYEQIVRICPEDVEAIKTAAKMHLNCGQIKRCVGILE
DYLKGHPSEADLSVIILLADVFMEIDAHNNALQHIEHAQMIYYSGKELPLELMIKAGICH
VFLGNIEKAEIHFSALQQENFSIHPEFITKVADAFMSTECFHSALKYYHMLELNVGADNE
GEIHVKIAQCYLSLNDRAKAIMFFYKALPMLKDSIDARVALASLILEDAKEDEAISLLSP
PKDLDADSLDSNSYMQNPWWLDGKIKLKLCHIYKAKGMLEDFVNTISPLVRESLYVKTLR
PKVKKRLTISVLRERISILNVQENDDVFGEVRPLASKSDLLRACRARKLLQKKEEQKAAD
KAAGIDLPSDYSDDESLLENRVSPLHDFLKDEAHHDLIIDLCKALQSLQRYSEALEIINL
TLRLVSDKLPGDREEQLQSLLAQISFNATDPKHGFDYVRSAIQKQPHSIAAWNCYYKITS
RLGKSHSKHAKFLRYMRNKHKRCVPPIVISAHQFTMLSHHQDAAREYLEAYKLMPECPLI
NLCAGTALINLTLGFRLQNKHQCLAQGLAFLYNNLQLTENSQEALYNIARAYHHVGLVSL
AASYYEKVLAACEKDYPIPKLLNENSEMENMKPGYCDLRRESAYNLHLIYKNSGAFDLAR
QVLKNHCTF
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atggaatcgaaaggaagtgaaatcgatgaatttgaaaaggcattggaatctgccttggat
ggaagcacagaagaagaggaagaagatgaaaacgaagaaggagaatatagtgatgacgat
gaagaggaagaagatgatgatgatgaagaagaagaagaagaagaagaaaatgctttggat
tcaatggaacaaaatcaacaatttgaatatgaagctctcgccgagaaaaaacgaaaaaca
cttgctgatgccaagggtgaagggtcagcgaagaaggcaaggcaagaggacatgactgga
gctagcttggctgaaatagaggagataatgaattttggtatgcgaaaaaagagacgacga
cgaatgcccaagagaagaggcaggcggaagggatcaaaaaacaaacttagccctgaaatt
acacggatgttgggtgatgctactcttcactatgctcatggtaattatgaagaggcttta
acagttttgagtgaggttgttaaacgagcaccgctagtggctgactcataccatacactt
ggacttgtccataaagcccttggaaatactgaaaaagctatgaaattttataggattgct
gcatttctgagaccgaaagattcatctttgtggaaactactttttagctggcacgtagaa
caaggagacatagctcgagcatggaagtgcctttctaaagctataagtgctgatcctgat
gatattagtctaagatcccttcatgcattattttatgatgaacttggagatcatcaaaga
gctgctgagtcatatgaacaaattgttcgaatctgtcctgaggatgttgaagcaataaag
acagctgcaaagatgcacctcaattgcggtcagattaaacgatgtgtaggcattttggaa
gattatctcaagggtcatccatctgaagctgatttaagtgtaatcattttgctggctgat
gtattcatggaaattgatgcacataataatgctcttcagcatattgagcatgctcagatg
atctactattcaggaaaagaactgcctttggaattaatgattaaagcaggaatctgccat
gttttcctgggaaatattgagaaggcagagattcactttagtgcactacaacaggagaat
ttctccattcatcctgaattcattactaaagttgctgatgcatttatgagtactgagtgt
tttcactctgcgttgaagtattatcatatgctggagttgaatgttggagctgacaatgag
ggcgaaatccatgtgaaaattgctcagtgttacttatccttgaatgatcgtgcaaaagca
attatgttcttctacaaagctttgcccatgctcaaagatagcattgatgcccgagtggct
ttggcgtcgctcatccttgaagatgctaaagaagatgaggctatttctttgctttctcct
cccaaagatttggatgcagattctctcgattctaattcctacatgcaaaacccatggtgg
cttgatgggaaaataaaactaaagctttgccacatatataaagccaaagggatgcttgaa
gactttgttaatacaatatcacccttggtccgtgagtcactctatgtaaaaacccttcgt
ccaaaggtgaagaaaaggctgacaataagtgttctgcgtgaaagaatcagtattctgaat
gttcaggaaaatgatgatgtttttggagaagtgagaccactggcttctaaatcagatcta
ttgagagcttgcagagcaagaaagttgcttcaaaagaaggaagaacagaaagcagctgat
aaagctgctggtattgatttgcctagtgactattcagatgatgaatctctgctagaaaac
agagtttctcctctgcatgattttttaaaggacgaagcgcatcatgatcttattatagat
ttgtgcaaggcattgcaatcgttgcaaagatattctgaagctctggagattataaatctc
accctgagattggtttctgataaactgcctggtgatagggaggagcaacttcagtctctt
ttagctcaaatatcttttaacgccacggatcctaaacatggttttgattatgtaagatct
gctattcagaaacagccgcacagcattgctgcctggaactgttattacaaaataacctca
agattgggaaagagccactcaaagcatgccaaatttctacgttacatgcgaaacaaacat
aaaaggtgtgttccacctatagtcatttctgctcatcagtttaccatgctcagccatcat
caagatgctgcaagagaatacctagaagcttataaactgatgccagaatgtcctctaatt
aatctgtgtgcgggaactgccttgatcaacttgacccttggatttagactccaaaataag
caccagtgtcttgcacaaggcttggcattcctctataataatttacagctaacagagaat
agccaggaggcattatataatatcgcccgtgcctatcatcatgttggactagtgtctcta
gcagcttcatattatgaaaaggtgcttgcagcttgcgagaaggattaccccattccgaaa
cttctgaatgagaattcagaaatggaaaatatgaaaccaggttactgtgacctgcgcaga
gaatctgcttataatttgcatttaatatataaaaacagtggagcatttgatcttgctagg
caggtcttgaaaaatcactgcactttctga
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