Populus trichocarpa (black cottonwood): 18104631
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Entry
18104631 CDS
T01077
Name
(RefSeq) two pore calcium channel protein 1 isoform X1
KO
K16900
two pore calcium channel protein, plant
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pop04040
]
18104631
Ion channels [BR:
pop04040
]
Voltage-gated cation channels
Calcium channel, two-pore (TPC)
18104631
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Motif
Pfam:
Ion_trans
EF-hand_7
EF-hand_6
EF-hand_1
Motif
Other DBs
NCBI-GeneID:
18104631
NCBI-ProteinID:
XP_024439248
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Position
13:complement(13732357..13751232)
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AA seq
742 aa
AA seq
DB search
MEKPLLGESSGGRDIRFRRRDQSTPKFPRRSDAITHGSPFQKAAALVDLAEDGIGIPEEI
LDQANFESVAKFYFIFIQFDIIWTLNYFAMIVLNFLEKPLWCQNNSGHSCNDREYFYLGE
LPYLTAAESFVFEGITLIILAAHIFFPISYEGFRIYWKNPLNCSKVICLCILVVDLVAYA
IYASPVAFNFLPFRIAPYIRVVLFILYIRDLQRSIIILGGMLKTYVNVLALGFLFLLFSS
WLAFVMFEDTQQGKIVFTSYGITLYQMFVLFTTSNNPDVWIPAYKVSRWYSLFFILYVLI
GVYFVTNLVLAVVYDSFKDQLVKQVSEMDRSRKRILIKAFNLIDKNDAGFLNKEQCIHLF
EALNKYRTLPSISREEFELIFDELDDSHDFKINLDEFEDLCNAIALRFQKEDVPSYFEYL
PSIYHSLFSEKLKEFVRSPKFGYIISSILVMNLLAVITETTLDIANNSAQKVWQEVEFVF
GWIYVVEMALKIYAYGFENYWRDGQNRFDFVITLVIVIGETVTFASPNELTFLSNGEWIR
YLLIARLLRLIRILMYVRSYRAFVATFLTLIPSLMPYLGTIFCVMCIYCSLGIQIFGGLV
NAGNLDLEGTGLAEDDYLLFNFNDYPNGMVTLFNLLVMGNWHEWMQSYKDLTGTYWSLAY
FISFYLVTVLLLLNLVMAFVLEGFFAEMELETAEKCEAEDKEGSNSKSRRRSVGTKTRSQ
RVDNLLHHMLSAELEKPECSNA
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggagaagcctttgttaggagaaagcagcggtggacgagatatacgttttagaagaaga
gatcagtccacgcccaagtttcctcgacgttctgatgccatcactcatggttctcccttt
caaaaagctgctgctcttgttgatctggctgaagatggtattggtataccggaagaaatt
cttgatcaagcaaactttgaaagtgttgcaaagttctacttcatctttattcagtttgat
atcatttggaccctcaattactttgcaatgatagtactaaatttcttggagaaaccgctg
tggtgtcaaaataattctggacattcttgcaatgatagggagtacttctatcttggggag
ctgccgtacttaactgctgcagagtcctttgtttttgagggcataactctcatcatacta
gcggcacatattttctttccaatatcatatgaaggtttccgtatctactggaaaaatcct
cttaattgttctaaggtcatttgcctatgcattttggttgttgatttggtggcttatgcg
atttatgcgtctccagtggctttcaattttcttcctttcagaattgcaccttacataaga
gttgtcttgtttattctatacatcagggacttgcaaaggagcatcatcattttgggcgga
atgcttaagacttatgtgaatgtcttggctctagggtttttatttctgcttttctccagt
tggttagcctttgtcatgtttgaagatacccaacaggggaaaatagttttcacttcatat
ggcatcacattgtatcagatgtttgttttatttacaacatccaacaatccagatgtatgg
atacctgcatacaaggtttcacgttggtatagcctttttttcatcctctacgtgctaata
ggagtgtactttgtcaccaacttggttcttgctgtcgtatatgacagcttcaaagaccag
cttgtaaaacaagtttctgagatggaccgttcgaggaaaagaatactgatcaaagccttc
aatctcattgataagaatgatgctggattccttaataaggagcaatgcattcatttattt
gaagcacttaataaatacaggactttgccaagcatatcaagggaagaattcgagttgata
tttgatgaacttgacgattctcatgatttcaagatcaacttggatgaatttgaggacctt
tgcaatgcaatcgctctaagatttcaaaaggaggatgttccatcttactttgaatacctt
ccatcaatctaccattcacttttctctgaaaagttgaaagagtttgtacgaagccctaaa
tttggctacataatatcatccattctcgtcatgaatctgttagctgtcatcactgagaca
acgcttgatatagccaacaattctgctcaaaaggtgtggcaagaagtggaatttgtcttt
gggtggatctatgttgtggaaatggctctaaaaatctatgcatatggatttgagaactat
tggagggatggtcaaaatcgctttgattttgtgatcactttggttatagttatcggagag
actgtaacttttgcatctcctaatgagctgacttttctttcaaatggagaatggattcgt
tacctcctcattgcaagattgttaagattaataaggatcttgatgtatgttagaagttac
cgggcttttgttgccacatttttaaccctcataccaagtctgatgccttatctgggcaca
atattttgcgtcatgtgtatttattgctctcttggtattcagatctttggcgggcttgtg
aatgccgggaacctcgatttggaaggaacaggtcttgctgaagatgattatttgcttttc
aattttaatgactatccaaatggaatggtgacactttttaatctgctcgttatgggaaat
tggcacgagtggatgcagagttacaaggatttgactggaacttactggagccttgcatac
ttcatcagcttctacctagtaacagttctattgcttttgaatttggttatggcttttgtc
ctggagggattctttgctgaaatggaacttgagacagcagaaaaatgtgaagcagaggac
aaggaaggaagcaactcaaaatcccgacgccgatctgttggcacaaaaactcgcagtcaa
agggttgataatcttctgcatcatatgttaagtgcggagctggaaaaaccagaatgctcc
aatgcataa
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