KEGG   Populus trichocarpa (black cottonwood): 18104643
Entry
18104643          CDS       T01077                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RMA1H1
  KO
K10666  E3 ubiquitin-protein ligase RNF5/185 [EC:2.3.2.27]
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    18104643
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pop04121]
    18104643
Enzymes [BR:pop01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     18104643
Ubiquitin system [BR:pop04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    18104643
SSDB
Motif
Pfam: zf-C3HC4 zf-RING_UBOX zf-C3HC4_2 RING_XB3-XBAT31 zf-RING_2 zf-RING_5 zf-C3HC4_3 zf-C3HC4_4 Prok-RING_4
Other DBs
NCBI-GeneID: 18104643
NCBI-ProteinID: XP_006376502
LinkDB
Position
13:13842033..13845280
AA seq 263 aa
MALDQYMEETMAQNDYNREDKPSLPNWKSVSETVIDSDDSRSSGFDCNICLDSVHDPVVT
LCGHLYCWPCIYKWLHFQSISAENQDQHPQQQCPVCKAEVSQSTIVPLFGRGQTTKPCKG
KAPNLGIIIPRRPPGRACGFDSPRSPIATSSPRVTPQIHHRHNYPHQSQHYYSQPGSNST
SPMRSPGGSTLNMPALEVGMFGEMMYSRVFGNSITNIHSYPNSYHLAGSASPRVRRHVMQ
ADRSLSRICFFLFCCVFLCFLSF
NT seq 792 nt   +upstreamnt  +downstreamnt
atggccttagaccaatacatggaagaaactatggctcaaaatgactataatagagaagat
aagccatcactgccaaactggaaatctgtttctgagacagtcatagactctgatgatagc
cgctccagtggttttgattgcaatatttgcctagactccgtgcatgatccggtggtcact
ctttgtggtcacctctactgctggccctgcatatacaaatggcttcatttccagagcatc
tcggcagaaaaccaagatcagcacccacaacagcaatgtcctgtatgcaaagccgaagtt
tcccaatctacaatagttccactctttggccggggccaaaccacaaaaccctgcaagggc
aaagcccccaatctcggtataatcattccacgaagacctcctggtcgtgcatgtggtttt
gactcaccaagatcacctattgccaccagcagtcctcgcgtaacaccgcaaattcatcat
cggcataattatccgcatcaatcgcaacactactattctcagccagggagtaactctact
tccccgatgcgtagcccagggggctctacattgaacatgcctgcgctagaggtcgggatg
ttcggcgaaatgatgtactcaagggtcttcggtaactcgataaccaacatccacagttac
ccaaattcgtatcatctagctggaagcgccagcccaagagtgagaaggcatgtaatgcaa
gctgataggtcgctcagcagaatctgcttcttcctcttctgctgtgtatttttgtgtttt
ctctctttctga

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