Populus trichocarpa (black cottonwood): 18104874
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Entry
18104874 CDS
T01077
Name
(RefSeq) heat stress transcription factor B-4
KO
K09419
heat shock transcription factor, other eukaryote
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
18104874
Transcription factors [BR:
pop03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
18104874
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Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
Motif
Other DBs
NCBI-GeneID:
18104874
NCBI-ProteinID:
XP_006374917
UniProt:
A9PHM4
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Position
14:1684813..1686725
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AA seq
368 aa
AA seq
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MALMLDNCEGILLSLDSHKSVPAPFLTKTYQLVDDPATDHIVSWGEDDTTFVVWRPPEFA
RDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANEFFKKGEKHLLCEIHRRKTAQPQ
VAINQHHHHQHHPHSPFGVNGPSFFPFSSRTSISPSDSDEQANNNWCDSPPLTSPPRGVA
SATVIGGGGGYNSSVFALSEDNERLRRSNNMLMSELAHMKKLYNDIIYFVQNHVKPVAPS
NSYSSSLLLCGPAPYATANPVTSNGSLAQKPLNQLLGYYPTTAPNNPKQAPQVHVLNSPT
TTSQSSLTFLEEANNNGCKTKLFGVPLHSKKRLHPEYGSNPGNMETNKARMVLDKDDLGL
NLMPPSRC
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggctcttatgttggataattgtgaagggatattactctcattggactcccacaagtca
gtcccagctcccttccttaccaaaacctatcaactggtagatgatccagccactgaccat
atagtttcttggggtgaagatgacactactttcgttgtttggagaccacctgagtttgct
cgtgatctccttcctaactatttcaagcacaacaacttctctagctttgtcaggcaactc
aatacatatggttttaggaagattgtacctgaccgatgggagtttgctaatgagtttttc
aagaagggagagaagcatttgctttgtgaaatccatagaaggaaaacagctcagccacaa
gtagctatcaatcagcaccaccatcatcagcaccacccacattctccctttggtgttaac
ggacccagtttctttcccttttcaagcagaaccagcatctctccgtctgattcagatgag
caagccaacaacaactggtgtgattcgcctcctctcacttcaccaccaagaggggttgct
agcgccacagttattggtggtggaggtggatataatagctcagtttttgccttatctgaa
gataatgagagactgaggagaagcaacaatatgctaatgtctgagcttgcacacatgaaa
aagctttacaatgatattatttactttgtccaaaatcatgtcaagcctgttgctcccagc
aattcctactcttcttctttgcttctttgtggcccggcaccatatgctactgctaatcct
gttacttctaatggttctttggcacaaaagcctttaaaccagcttcttgggtattatcct
actactgctccaaacaaccctaagcaagctcctcaagttcatgttttgaactctccaaca
actacttcgcagagctctttgacctttcttgaagaagccaacaacaacggttgcaagaca
aagttgtttggtgtccctttacattccaagaaaagattgcacccagagtatggctctaat
ccaggaaatatggagacaaacaaggctcgtatggtgttggacaaggatgatttaggatta
aacctcatgcctccttcaagatgttag
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