Populus trichocarpa (black cottonwood): 18104983
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Entry
18104983 CDS
T01077
Name
(RefSeq) exocyst complex component SEC3A
KO
K19983
exocyst complex component 1
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
18104983
Membrane trafficking [BR:
pop04131
]
Exocytosis
Tethering complex
Exocyst complex
18104983
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sec3_C-term
Sec3_CC
Sec3-PIP2_bind
Vps52_CC
DUF2371
Motif
Other DBs
NCBI-GeneID:
18104983
NCBI-ProteinID:
XP_024441192
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Position
14:complement(2526200..2535351)
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AA seq
890 aa
AA seq
DB search
MAKSSADDEELRRACEAAIEGTKQKIVLSIRVAKSQGIWGKSGKLGRHMAKPRVLALSTK
SKGQRTKAFLRVLKYSNGGVLEPAKLYKLKHLSKVEVIANDPSGCTFTLGFDNLRSQSVA
PPQWTMRNVDDRNRLLFCILNICKDVLGRLPKVVGIDVVEMALWAKENTPTVPKQTNQQD
GGGPVEATVTESDLKVSVERELVSQAEEEDMEALLGTYVMGIGEAEAFSERLKRELLALE
AANVHAILESEPLVEEVLQGLEAATNCVDDMDEWLGIFNVKLRHMREDIESIETRNNKLE
MQSVNNVSLIEELDKLLERLRVPSEYAACLTGGSFDEERMLQNIEACEWLTGALRGLQVP
NLDPIYANMCAVKEKRTELEKLKTTFVRRASEFLRNYFASLVDFMISDKSYFSQRGQLKR
PDHADLRYKCRTYARLLQHLKSLDKNCLGPLRKAYCSSLNLLLRREAREFANELRASTKA
SRNPTVWLEASTGSSQSAHNTDTSSVSEAYAKMLTIFIPLLVDESSFFAHFMCFEVPALV
PPGGVVNGNKGGNYNDADDDDDDDLGIMDIDENDGKAGKNSADLAALNESLQDLLNGIQD
DFYAVVDWAYKIDPLRCISMHGITERYLSGQKADAAGFVRLLLGDLESRISMQFSRFVDE
ACHQIERNERNVRQTGVLSYIPRFATLATRMEQYIQGQSRDLVDQAYTKFVSIMFVTLEK
IAQTDPKYADVFLLENYAAFQNSLYDLANVVPTLAKFYHQASEAYEQACTRHISMIIFYQ
FEKLFQFARKIEDLMYTITPEEIPFQLGLSKMDLRKMLKSSLSGVDKSISAMYKRLQKNL
TSEELLPSLWDKCKKEFLDKYESFAQLVAKIYPNESIPSVSEMRELLASM
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaatcgagcgccgacgacgaggagctcaggagagcctgcgaagcagcaattgaa
ggcacaaaacagaagatcgtattgtcgatccgtgtcgccaagagccaagggatctggggc
aaatctggcaaattaggccgtcacatggccaaacctagggttctcgctctctccacaaaa
tctaagggtcagaggacgaaagcctttcttcgagtattaaaatattcaaatggaggagtc
ctcgagccggcaaagttatacaaactcaagcatctttcgaaagttgaggttatagctaat
gatcccagcggatgcacgtttaccctgggatttgataaccttagaagccagagtgttgct
ccgccacaatggactatgcgcaatgttgatgataggaaccgccttttattttgcatccta
aacatctgtaaggatgtacttggacgtcttccaaaagttgttggcatagatgttgtggaa
atggcactttgggctaaggaaaatacacccaccgttcccaagcaaacgaatcagcaagat
ggaggagggcctgttgaagctacagttacagaaagtgacttgaaagtgtctgttgaaaga
gaactggtctctcaagctgaggaagaggacatggaggctcttcttggcacttatgtaatg
ggtattggtgaagcagaggcattttcagaaaggttgaagcgtgagcttcttgccctggaa
gctgcaaatgtgcatgccattttagaaagtgaacctttagtagaagaggtgttgcaaggg
cttgaggcagcaacaaattgtgttgatgacatggatgaatggctaggcatcttcaacgtg
aaacttagacatatgagagaagacattgagtcgatagaaacccgcaataacaagttggag
atgcagtctgtaaataatgtatcactcattgaagaactcgataagcttcttgaacgactg
cgtgtcccttctgaatatgcagcttgtctaacagggggttcgtttgatgaggaacgcatg
cttcaaaacattgaagcatgtgagtggttgactggtgctttacgtggtcttcaagtgcct
aatttggatccaatctatgcaaatatgtgtgctgttaaagaaaagcggacagaacttgaa
aaattaaaaactacatttgtcaggagagcttctgagttcttgagaaactacttcgcaagt
ttggtggatttcatgataagcgacaagagttatttttcacaacgtggacagttgaagagg
cctgatcatgctgacttaaggtacaaatgcaggacatatgctcgccttctacagcattta
aagagtctcgataagaattgcttgggtcctttgaggaaagcatattgtagctcccttaac
ctgcttcttcgccgggaggctcgtgaatttgctaatgagcttcgtgctagtacaaaagca
tcaagaaatccaactgtctggctggaagcttctacaggctcgagtcaaagtgcacataat
acagatacatcttcagtttctgaagcttatgcaaaaatgctgacaatattcatcccactc
cttgtagatgagagttctttttttgcacacttcatgtgcttcgaggttcctgcacttgtt
cccccaggaggtgtggttaatggaaataaaggtgggaattacaatgatgctgatgacgat
gacgatgatgatttgggtattatggacattgatgagaatgatggcaaagctggtaaaaat
tctgcagatctggcagcactaaatgaatctcttcaggatttgcttaatggaatccaagat
gatttttatgctgtggttgattgggcatacaagatagatcccctgcgctgcatatcaatg
catgggattacagagcgctatctctctggtcagaaagctgatgctgcaggatttgtgcgt
ctcttgcttggtgacctagagtcaagaatttctatgcaattcagtcgttttgttgatgaa
gcttgccaccaaattgaaagaaatgagcgtaatgtgcggcagacaggggttttatcctac
atcccaagatttgcaactcttgcaactcgtatggagcagtatatccagggacaatctagg
gatttggttgatcaggcatacacaaaatttgttagtattatgtttgtgactttggagaaa
attgcacaaacagatccaaaatatgcggatgtcttccttttggaaaactatgcagcattt
caaaatagcttgtatgacctagccaatgttgtgccaactttagccaaattctatcaccag
gcaagcgaagcttatgaacaagcttgtacacgtcatatcagcatgattattttctatcaa
tttgagaaacttttccagtttgctcgcaagattgaggatttgatgtacaccataacacca
gaagagatcccattccagcttggattgtcaaaaatggatctccgaaagatgttaaaatct
agtttatctggggttgacaagtctattagtgcaatgtataagaggttacagaagaactta
acttcagaagaactattaccttctctgtgggataagtgcaagaaagagttcttggacaag
tatgaaagttttgcacaactcgttgcaaagatctatcccaacgagagcatcccttcagtg
tcagaaatgagagagcttctggcttccatgtga
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