Populus trichocarpa (black cottonwood): 18105007
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Entry
18105007 CDS
T01077
Name
(RefSeq) probable NEDD8-conjugating enzyme Ubc12-like
KO
K10579
ubiquitin-conjugating enzyme E2 M [EC:
2.3.2.34
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
18105007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
18105007
Enzymes [BR:
pop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.34 E2 NEDD8-conjugating enzyme
18105007
Ubiquitin system [BR:
pop04121
]
Ubiquitin-conjugating enzymes (E2)
UBL-conjugating enzymes
18105007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UQ_con
DMAP1
Motif
Other DBs
NCBI-GeneID:
18105007
NCBI-ProteinID:
XP_052302745
LinkDB
All DBs
Position
14:2714756..2717418
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AA seq
183 aa
AA seq
DB search
MIKLFKVKENQRETQSADGKPPVKKQSSGELRLQKDITELNLPKSCCISFPDGKDSLMNF
EVTIKPGEGYYKGGKFVFSFQVSPLYPHDAPEFLCCLQVYHPNIDLEGNVCLNILREDWT
PILNINIIIYGLFNLFTQPNHEDPLNSDAANVLRDDPDEFKSNVKRAMSGDSLGDAHFSS
CLT
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgattaaattgttcaaggtaaaggaaaatcagagggaaactcagagtgcagatgggaag
cctccagtcaagaagcaaagttctggggaattacgtcttcagaaagatataactgagctg
aacctaccgaaatcatgttgcatatccttccccgatggaaaggacagcctgatgaacttc
gaggtcaccattaagcctggagaaggatattacaagggtggcaaatttgtgttctcattt
caagtttcacctctctatcctcatgacgcgccggaatttctttgctgtttgcaggtctac
catcctaatattgatctggaaggcaatgtgtgcctaaatattcttcgagaagactggaca
cctatcctaaatataaacatcatcatctatggattgtttaacctattcacgcaaccaaat
catgaggatcctctgaattctgatgcagctaatgtgttgagagatgatccggatgagttt
aaatcgaacgtgaagagggcaatgagtggtgattctttaggagatgctcacttctcttcc
tgcctaacttag
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