Populus trichocarpa (black cottonwood): 18105029
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Entry
18105029 CDS
T01077
Name
(RefSeq) NAD-dependent malic enzyme 62 kDa isoform, mitochondrial
KO
K00028
malate dehydrogenase (decarboxylating) [EC:
1.1.1.39
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00620
Pyruvate metabolism
pop00710
Carbon fixation by Calvin cycle
pop01100
Metabolic pathways
pop01200
Carbon metabolism
Module
pop_M00171
C4-dicarboxylic acid cycle, NAD - malic enzyme type
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
18105029
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
18105029
Enzymes [BR:
pop01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.39 malate dehydrogenase (decarboxylating)
18105029
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Motif
Pfam:
Malic_M
malic
DUF1103
Motif
Other DBs
NCBI-GeneID:
18105029
NCBI-ProteinID:
XP_006375096
UniProt:
B9MVC4
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Position
14:complement(2815488..2824568)
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AA seq
627 aa
AA seq
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MSNFSNQIRASSSLIKRLKQRMTNPAALMQATRHFTTLEGHRPTIVHKRSLDILHDPWFN
KGTAFSMTERDRLDLRGLLPPNVMTSEQQIQRFAADLKRLEVQARDGPSDPYALAKWRIL
NRLHDRNETMYYQVLIANIEEYAPIVYTPTVGLVCQNYSGLFRRPRGMYFSAEDRGEMMS
MVYNWPAEQVDMIVVTDGSRILGLGDLGVQGIGIAIGKLDLYVAAAGINPQRVLPVMIDV
GTNNEKLLKDPLYLGLQENRLDGDEYIAVIDEFMEAVFTRWPHVIVQFEDFQSKWAFKLL
QRYRNTYRMFNDDVQGTAGVAIAGLLGAVRAQGRPMIDFPKQKIVVAGAGSAGIGVLNAA
RKTMARMLGNNESAFESAGRQFWVVDAKGLITEERENIDPEALPFARKVKEASRQGLREG
ASLAEVVREVKPDVLLGLSAVGGLFSNEVLEALKGSTSTRPAIFAMSNPTKNAECTPEEA
FSIVGDNILFASGSPFQDVDLGNGHIGHCNQGNNMYLFPGIGLGTLLSGSRIISDGMLQA
AAECLAEYMAEEEVLNGIIYPSTSRIRDITKEVAAAVVKEAIKEDLAEGYREMDARELQK
LSQEEIVEYVKNNMWSPDYPTLVYKRD
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatttttccaatcagatcagagcgtcttcgtctctgatcaaacggctcaaacaa
agaatgacgaatccggcggccctgatgcaggctactagacatttcactacattggagggc
caccgtcctaccattgttcacaaacggagccttgatattcttcacgatccctggttcaac
aaggggacagcgttttctatgacagaacgcgaccgtctcgatctacggggacttctccct
cccaatgttatgacttctgaacagcaaattcaacgcttcgcggctgacctgaagaggctt
gaagtgcaggcaagagacggaccatctgatccatatgcgctggctaagtggcggatactt
aatcgattacatgataggaatgagactatgtactaccaggttctaattgccaatattgag
gaatatgcacccatagtttataccccaactgttggtcttgtttgccaaaattacagtggt
ttgtttagaagaccaaggggaatgtatttcagtgctgaagaccgtggagaaatgatgtcc
atggtgtataactggccagctgagcaggttgacatgattgttgttacggatggaagcagg
atattgggtcttggagatcttggagttcagggaattggtattgctattgggaagctagat
ttgtatgttgctgctgctgggataaatcctcaaagggtgcttcctgtcatgattgatgtt
ggaactaacaatgagaagttactcaaagatcccttgtatttgggattacaagaaaaccgt
ctagatggtgatgagtatattgcagtcattgatgaattcatggaggcagtgtttactcgc
tggccacatgtgatcgtgcagtttgaagatttccaaagtaagtgggcattcaagttgttg
cagcgatataggaatacctacagaatgttcaacgatgatgtccagggaacggcaggtgtt
gctatagctggtcttttaggagctgtaagagcacaaggaaggcctatgattgattttccg
aagcaaaagattgttgttgctggtgctggaagtgcaggaataggggttctcaatgctgcc
aggaaaacaatggctagaatgcttggaaataatgaatctgcttttgaaagtgcaggaaga
cagttctgggtagttgatgctaagggtcttattacagaggaacgtgaaaatattgatccg
gaagctctgccatttgcaaggaaggtcaaagaagctagtcgtcaaggattaagggaaggt
gcaagtcttgcagaagtggtgcgagaagtgaaacctgatgttcttcttggattatctgca
gttggaggtttgttctcaaacgaggtattagaggccctcaaaggttcaacttcgactaga
ccagccatatttgctatgtcaaatcccacaaaaaatgctgaatgcactcctgaagaagca
ttttccattgtgggtgacaatattcttttcgcaagtggaagtccattccaagatgtggat
cttggaaatggtcatattggccactgcaaccagggaaacaacatgtatctctttccaggt
atcggacttgggactctactttctggttctaggatcatctctgatggcatgcttcaggct
gcagctgaatgcctagccgaatatatggcagaggaagaggttctaaacggaatcatatac
ccttcaacatctagaatacgagatataacaaaggaagtggctgcagctgtggtgaaggaa
gccataaaagaggatcttgcggaaggataccgtgaaatggatgctagggagctccagaaa
ctcagccaggaggaaattgtagaatatgtgaagaacaacatgtggagtccggattaccca
acattggtctataagagggattga
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