Populus trichocarpa (black cottonwood): 18105061
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Entry
18105061 CDS
T01077
Name
(RefSeq) leucine carboxyl methyltransferase 1 homolog
KO
K15451
tRNA wybutosine-synthesizing protein 4 [EC:
2.1.1.290
2.3.1.231
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pop03016
]
18105061
Enzymes [BR:
pop01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.290 tRNAPhe [7-(3-amino-3-carboxypropyl)wyosine37-O]-methyltransferase
18105061
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.231 tRNAPhe {7-[3-amino-3-(methoxycarbonyl)propyl]wyosine37-N}-methoxycarbonyltransferase
18105061
Transfer RNA biogenesis [BR:
pop03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
18105061
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LCM
Motif
Other DBs
NCBI-GeneID:
18105061
NCBI-ProteinID:
XP_006375134
UniProt:
U5FSI2
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Position
14:3008258..3014023
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AA seq
344 aa
AA seq
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MATRPVADSHSNRAAVQATNDDASASKLSCVKKGYMKDDYIHLFARRPVRRSPIINRGYF
ARWAALRKLLFQFLDCESNIDGKCDSKKQILSFGAGFDTMYFQLQDEGKAPFLYVELDFK
EVTSKKAAIIETSSQLREKLGATASILPEKGEVLSDHYKLLSVDLRDIQKLDDIIALAGM
NPSLPTFIIAECVLIYLDPESTRGIVGWASKTFSTAAFFLYEQIHPDDAFGQQMIRNLES
RGCALLGIYDTPTLLAKEKLFLDQGWQRAVAWDMLKVYTDFIEAKERRRIERLELFDEFE
EWYMMQEHYCVAYAINDAMGFFGDFGFTKTQPHVINSPSTVALP
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaaggccggtagccgattcgcatagcaacagagcagcagttcaagccacaaac
gatgacgcttccgccagtaaactgtcttgtgttaagaagggatacatgaaagacgattat
atccatttatttgctagaagacctgtgaggcgatctcctataatcaaccgcggctatttt
gcgcgctgggctgctcttcgaaagcttctcttccagtttcttgattgtgaatcgaatatt
gatggaaaatgcgattcaaagaagcagatattatcattcggagcaggatttgataccatg
tattttcaactacaggatgaaggaaaagcgccatttttatatgtagagctggattttaag
gaggtaactagtaaaaaggcagcaattattgaaaccagcagtcagttgagggaaaagctt
ggtgctacggcttcaatcttaccagagaagggagaagtgctcagtgatcattacaagctg
ctctcggttgatttgcgtgatatacaaaaactagatgatatcatagcattggctggtatg
aatcccagcttgccaacgtttataattgcagaatgcgttttaatatacttggatcctgag
tcaactcgtggtatagtcggttgggcttcaaaaacgttttcaacagcagcatttttctta
tatgagcagatacatccggatgatgcttttgggcagcaaatgatcagaaacttggagagt
cgaggttgtgcactattgggtatctatgacacaccaactttacttgcgaaggaaaaactt
tttcttgatcaaggatggcagagagctgttgcctgggacatgctgaaagtttatactgat
tttattgaagctaaagaaaggcgcaggattgaacgattggaattgttcgatgagtttgaa
gagtggtacatgatgcaggagcactactgtgtggcttatgcaatcaacgatgccatggga
ttctttggggattttggttttactaagacccagccgcacgtgatcaactctccctcaaca
gtagcattgccatga
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