Populus trichocarpa (black cottonwood): 18105076
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Entry
18105076 CDS
T01077
Name
(RefSeq) RGG repeats nuclear RNA binding protein A
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pop03041
]
18105076
Spliceosome [BR:
pop03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
18105076
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HABP4_PAI-RBP1
Stm1_N
Radical_SAM_N
Motif
Other DBs
NCBI-GeneID:
18105076
NCBI-ProteinID:
XP_006375155
UniProt:
B9MV71
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All DBs
Position
14:3182413..3185846
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AA seq
373 aa
AA seq
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MAMINPFDLLVDDAEDPSLIAALKPVVSPPAAAAAKKGPAQTQPKPAPAAKLPSKPLPPS
QAVREAKTEGGRGGGRGGGGGRGYGRGRGGYNRDFNNNESSFGNSGAPTVQGAAEDGDTA
KTFESRGYGGPRGGGFRGGRRGGFGNEEVGEGERPRRTNERWSGTGRGNEMKREGSGRGN
WGTPTDELALVTEEAANEGEKNLGDDKPVEEAAADRKKENPANEPEEKEPEDKVMTLEEY
EKVLEEKRKALQALKTEERKVDTKEFQSMQQLSNKKENNDVFIKLGSDKDKRKEAYEKDE
KAKKSVSINEFLKPAEGERYYGSGSRGRGRGRGARGFGNRDGMSSGFGNRDGMSSVPAPS
IEDPGQFPTLGGK
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgatcaatccttttgatttattggttgatgacgccgaggatccatctctcatc
gctgctctaaagccggtggtttctcctcccgccgcagcggctgctaagaaaggtccagct
cagactcaacctaaacccgctcctgctgctaagctcccttccaagcctcttcctccttca
caggctgtgagggaagcgaagactgaaggtgggagaggaggaggccgaggtggtggtgga
ggaagaggatatgggcgtggtcgtgggggatataatagggatttcaacaacaatgagagt
tcattcggtaactctggagcaccaactgttcaaggtgctgctgaagatggagatactgca
aagacctttgaatcacgtggatatggtggacctcgtggtggtggtttccgtggtggccgt
cgtgggggttttggtaatgaagaagttggtgaaggagagcgtcctcgtcgaactaatgaa
cgttggagtgggactggacgtggaaatgagatgaagcgtgaaggctctggtcgtgggaac
tggggaactccgactgatgagcttgccctggtaactgaggaagctgccaatgagggtgag
aagaatttgggtgatgacaagcctgtggaggaagcagcagcagataggaaaaaggagaac
cctgctaatgaacctgaagagaaagaaccagaggataaggtgatgactcttgaagagtat
gagaaggtgctggaagagaagaggaaggccctgcaggcacttaagacagaagaaagaaag
gtcgacactaaagagtttcaatccatgcagcagctttcaaacaagaaggaaaacaacgat
gtctttattaaattgggttctgacaaggataagcggaaagaggcgtatgagaaagatgag
aaagctaagaagtctgtcagcattaacgagttcttgaagcctgctgaaggggagaggtac
tatggctcaggcagtcggggtcgtggccgtggccgtggagcaagaggttttggcaataga
gatggaatgagcagcggttttggcaatagagacggaatgagcagcgtgccagccccttcc
attgaagatcccggacaattcccaaccctgggtggcaaatga
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